Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00245 ATGATCAAGAAGGAGGAGAAGGGTGTGAAACCTATTTTAGTCAACATTGCCTTGGCTTTTGGTTTTTCTTTTGCTGGATTTCTCTGCTCACGCCTCAGAATCTATCAAGGTCACGAAGCATGCACCGACGAATTGAGTAGCAGTAAACAAAATGGTGATAGAGATATGTTCCTTCTACCTGAATTTGACGACCTCGTTAAGGAGGTAGAGTTTGAAGTAGAGGCGCATGCAGGTCTTGAACAAGAGATACATCAACTCAAGAACATGGTTAGAATGCTTCAGGACAAGGAACAAAATCTCGAGGTTCAACTACTTGAGTACTATGGTCTTAAAGAGCAAGAAACGGTGGTGATGGAACTCGAAAATAGATTGAAGATAAGTAATATGCAGGTAGAGATGTTCAATCTGAAGGCTCAAAACTTACAGTCTGAGAATCGCAGATTAAGGGAACATGTTGCGGATCATGCAAAAGTGCTGGCTGAGCTTGACGCAGCAAAAGCAAAAATCGAGCTGCTCGATAAGGATATTAGGCGTGAAGCTGAACAGAATGAAGAGCAAAGAGTAGCCAAGTTGCAAGACCAAGAGTGTAAAGACGCTGCTTGTGATCAGGACACTAAAATTAAGCTGCAAAAGATAGAGGCGCTTGAGTCTGAAGTCCAAGAGTTGAGGAAATCTAATTCAAGATTGCAGATAGAGAATTCTGGCTTAACTAGAAGATTCGATTCCACGCAGGTCCTTGCTAATGATGCGAATCAAGAAAGGGAGCGTCTTAGAAAAGAAAATGAGGACTTGATGAAGCAAATTGAGCAACTAAAATCTGATCGACGTTCAGATGCTGAAGAATTAGTGTACGTGTGGGGGTTAAATGCTCGTTTACGACACGAGCTGCAGAATCATCAGCCTCTACACAATAAAACAGTTGCAAAGGACTCTGAGATTGAAGCCAAGAAACTAATACTTGAATGTGCTGATACTAACAAACTAGGGAGTACTACGGATTTTGATTTAAATCAACGGTCCTCCTCGCAATCTTCTTCTATTACTGACTCTGGAGAGTATGATCATTTTTCTTCCAAAACTAACACCACAAGTCAGAACAAGTTTTTTAGCAAGCTTAGAAGATTGATATTAGGAAAGGATAGACATCATCGTCGTATTGAGGTTTCATCTAGATATCAAGAAAACAGCAATTCTCAACGGCGGAGTACATCAACCGACACTGACGGCATAGCTTCCTTTGATAGGAGATATTCAAGTTTTGACGGAGAAGGTTCCTTCTCCGACTTTTTAGGCTTAGAGAAATCTGATTTGGAGAAATATGCAGAAGCTCTAGAAGATTCTAGTGCGAATGATAAACATCAAAGACGAGGAAGATCAACATCATATAGTTAG 1392 0.4059 MIKKEEKGVKPILVNIALAFGFSFAGFLCSRLRIYQGHEACTDELSSSKQNGDRDMFLLPEFDDLVKEVEFEVEAHAGLEQEIHQLKNMVRMLQDKEQNLEVQLLEYYGLKEQETVVMELENRLKISNMQVEMFNLKAQNLQSENRRLREHVADHAKVLAELDAAKAKIELLDKDIRREAEQNEEQRVAKLQDQECKDAACDQDTKIKLQKIEALESEVQELRKSNSRLQIENSGLTRRFDSTQVLANDANQERERLRKENEDLMKQIEQLKSDRRSDAEELVYVWGLNARLRHELQNHQPLHNKTVAKDSEIEAKKLILECADTNKLGSTTDFDLNQRSSSQSSSITDSGEYDHFSSKTNTTSQNKFFSKLRRLILGKDRHHRRIEVSSRYQENSNSQRRSTSTDTDGIASFDRRYSSFDGEGSFSDFLGLEKSDLEKYAEALEDSSANDKHQRRGRSTSYS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00245 463 MobiDBLite consensus disorder prediction 331 361 - -
Vifa5g00245 463 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 46 395 IPR040265 -
Vifa5g00245 463 MobiDBLite consensus disorder prediction 443 463 - -
Vifa5g00245 463 Coils Coil 205 281 - -
Vifa5g00245 463 MobiDBLite consensus disorder prediction 386 409 - -
Vifa5g00245 463 MobiDBLite consensus disorder prediction 391 409 - -
Vifa5g00245 463 Coils Coil 76 106 - -
Vifa5g00245 463 Coils Coil 110 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00245 Vifa-Chr5 34567672 34569142 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00245 - - psat:127087411 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g00245 5 34567672 34569142 Vifa5g00245 5 34567672 34569142 ECH
Vifa5g00245 5 34567672 34569142 Vifa4g01414 4 418893142 418895338 PCT