Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01414 ATGGAGAAAAGTATATTTAGAAAGTTTTTTAGTTTGATTTTTGTGAGAGAAGATAAAACTATGAAGCCTATTCTACTCAAATGTGGTTTGGCTTTCGCTCTTACCTTTGCCGGTTTTCTCTATTCGAATTATAGAGCTAGAAGGATCAAGTCTTCCCCCAAAGATCACCGCTCTTCAGGTCATGGGAGTGAAGTTAGTTTAGGAGGTATTAGAGCTTCGTCGAGTTCTTGCAACATTCATTCAGAAGGAAGCAATTTTGACGCGGAAGAAAAATGCATCAACAAGGTTGTATGTAGAAGTTCTTCAACCGGTGTGTCTCCAAGAACTAAACATAATGGAGATAAAGATGAGTTTCTCGTCCCCGAAATCAACGATTCTTCTGTTACATATTCGAGTCTCGAGAAAGATGCTTATGAGCAAGAAATCAGAAAACTGAGGAACAAGATCATAATGCTTCAAGAGAGGGAAAGAACTCTTGAGGTTCAACTTCTTGATTACTGCGGTCTAAGGGAGCAAGAAACAGCTGTAATGGAGCTTCAAAACCGATTGAAAATAAGCAACATGGAGTCGAAAATGTTCAATCTAAAGGTCGAGACGTTACAGTCCGAGAATAAGAGATTAGAGGTACAGGTTGCAGGTCAGTTAAAACTGCTCGCTGAACTCGAGGCTTCGAAAACAAAAGTGAAGTTTTTGAAGAAGAAAATTAGGAATGAAGCTGAACAGAATAAGGAACATATCGTAAATCTTAAACAAAAGGTTACCAAGTTGCAGGAGCTTGAATCTAAAGCTGTTGCGAATGATCAAGAAATTCAAATGAGGCTGGAAAAGCTAAATGGTCTTGAGGCTGACGTGGAACAATGTAGGAAATCTAGTTTGAGATTACAGAAGGAAAATTCTGACTTAGCTAGAAGATTGGAAGCTACTCAGATCCTTGCGAATTCTGTTCTTGAAGATCCTGAAGCAGATGCTCTAAGGGAAGAAAACGACCGTCTGAGGCGAGAGAACGGGGAATTGACGAAAGAACTTGTGCAACTAAAAGCGGATAGATGCACAGATGTCGAAGAATTAGTTTATTTAAGGTGGCTAAATGCTTGCTTAAGACATGAAATGCGAAACTATCAACCCCCATCTGGTAAAACAGTTGCAAGGGACTTAAGTAAAACCTTAAGTCCAGCTTCTGAGAAGAAAGCTAAACAGCTTATACTTGAATATGCAAATGCTGAAGGAAGAAGTAGCATTTCTGATTTGGATTCTGATCAATGGTCCTCTTCACAAGCTTCTTACGGCGAGTGTGAAGAGTATTTTCCTCACGATACTTCATCCAATGCACGAGTCAGCAACGCCACAAACAAGTCGAAGATCTTTGGAAAACTTATGAAGCTAATGAGAGGAAAGGATAGTAGCAGTAATCTCGGTAGTAGACGTACGTCTTTAGAAAAATCTAAATCTATAGGATGTAGCCTTAACATTTCTCCACATGATATTGGAGCCGATGGTCTTAGGAGTGAGTACGAATCTCTTAACGACACATCTCAAAATTCTATGGATTTAGAACGAACGTTGAGTATGAAGGAAGAGACTAGGAGAAATTCATCTGCTGAACGCTCAAAGAGTTTCTGTCCAAGGAAAAGTTGTTCAGGAGATTTCAAAATTACCAGTGACTTGTTCAAATATGCTGAAGCTTTAAAAGATTCTAGTACTAGCGAAACTCCGAAACTTGAAATACGTAGAAGATCAGCATCGTATAGTTCATTTTAA 1758 0.3902 MEKSIFRKFFSLIFVREDKTMKPILLKCGLAFALTFAGFLYSNYRARRIKSSPKDHRSSGHGSEVSLGGIRASSSSCNIHSEGSNFDAEEKCINKVVCRSSSTGVSPRTKHNGDKDEFLVPEINDSSVTYSSLEKDAYEQEIRKLRNKIIMLQERERTLEVQLLDYCGLREQETAVMELQNRLKISNMESKMFNLKVETLQSENKRLEVQVAGQLKLLAELEASKTKVKFLKKKIRNEAEQNKEHIVNLKQKVTKLQELESKAVANDQEIQMRLEKLNGLEADVEQCRKSSLRLQKENSDLARRLEATQILANSVLEDPEADALREENDRLRRENGELTKELVQLKADRCTDVEELVYLRWLNACLRHEMRNYQPPSGKTVARDLSKTLSPASEKKAKQLILEYANAEGRSSISDLDSDQWSSSQASYGECEEYFPHDTSSNARVSNATNKSKIFGKLMKLMRGKDSSSNLGSRRTSLEKSKSIGCSLNISPHDIGADGLRSEYESLNDTSQNSMDLERTLSMKEETRRNSSAERSKSFCPRKSCSGDFKITSDLFKYAEALKDSSTSETPKLEIRRRSASYSSF 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01414 585 MobiDBLite consensus disorder prediction 563 585 - -
Vifa4g01414 585 MobiDBLite consensus disorder prediction 519 536 - -
Vifa4g01414 585 MobiDBLite consensus disorder prediction 507 541 - -
Vifa4g01414 585 Coils Coil 321 348 - -
Vifa4g01414 585 Coils Coil 169 262 - -
Vifa4g01414 585 Coils Coil 277 297 - -
Vifa4g01414 585 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 22 523 IPR040265 -
Vifa4g01414 585 Coils Coil 135 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01414 Vifa-Chr4 418893142 418895338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01414 - - gmx:100781632 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01414 4 418893142 418895338 Vifa4g01414 4 418893142 418895338 ECH
Vifa5g00245 5 34567672 34569142 Vifa4g01414 4 418893142 418895338 PCT