Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g05012 ATGGAAATGGGGCTTGCAAGAGCCTCTTCATCGGAGGTGGTGGTTTATTCCGAACCTCCACCTCCGACGGAATCCAAGAGTCTCTTCAAACCTAAGGTCCGTACTCCGGCTGACATTGTTCGGAATACTCGAGATCTTCTCCGAATTCTCCAGAATGGTTCCGTTAACAAGCGTGATAATGACAAGATGATCGAGTTGTTTAAGAATTTGAGAGAGATGAAAACGATTCTGTATGGAAATAGTGAAGCTGAGCCGGTGCCGGAAGCTTGTTCGCAGTTGACGCAGGAGTTCTTTAACGAAAATACTTTTCGACTTCTTGTCGAGTGTCTTCCGAAATTGAACTTGGAGGCTAGGAAAGATGCTACTCAGGTTGTTGCAAATTTACAGAGGCAGCAGGTTCAATCTAAGCTGATTGCGTCTGATTACTTGGAAAAAAATATGGATCTTATGGATATTTTGATATCTAGCTATGAAAACCCGGAGATGGCTTTGCACTATGGTGCAATGTTAAGGGAGTGCATACGTCATCAGATTGTTGCAAAATATGTTTTAGAATCACCTCATATGAAGAAGTTCTTTAACTACATTCAGATCCCAAACTTTGACATAGCTGCAGATGCCGCAGCAACTTTTAAGGAACTCATGACGAGACATAAATCTACTGTAGCCGAATTCCTTTCCAATAATTATCAATGGTTTTTTGAAGAATATAACTCCAAACTATTGGAATCTTCCAATTATATTACAAGGCGTCAAGCTGTGAAGTTGTTGGGAGATATGTTACTTGATCGCTCAAATGCTGCTGTAATGGCAAGATATGTCAGCTCCAGAGAGAACTTAAGGATTTTAATGAATCTTATGAGAGAGTCAAGCAAGAGCATACAGATAGAAGCATTTCATGTTTTCAAGCTATTTGCTGCTAACCAGAAGAAACCACCAGATATCATCGGCATACTTGTTACCAACAGAAACAAGCTTTTGAGGTTGTTGGGCGACTTGAAAATCGATAAAGAGGATGAACAATTTGAAGCTGACAAAGCTCAAGTCATGAAGGAAATTGCTGCTCTTGAACCTAGGGAGTAG 1083 0.4063 MEMGLARASSSEVVVYSEPPPPTESKSLFKPKVRTPADIVRNTRDLLRILQNGSVNKRDNDKMIELFKNLREMKTILYGNSEAEPVPEACSQLTQEFFNENTFRLLVECLPKLNLEARKDATQVVANLQRQQVQSKLIASDYLEKNMDLMDILISSYENPEMALHYGAMLRECIRHQIVAKYVLESPHMKKFFNYIQIPNFDIAADAAATFKELMTRHKSTVAEFLSNNYQWFFEEYNSKLLESSNYITRRQAVKLLGDMLLDRSNAAVMARYVSSRENLRILMNLMRESSKSIQIEAFHVFKLFAANQKKPPDIIGILVTNRNKLLRLLGDLKIDKEDEQFEADKAQVMKEIAALEPRE 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g05012 360 PANTHER CALCIUM-BINDING PROTEIN 39-RELATED 27 358 IPR013878 -
Vifa4g05012 360 Pfam Mo25-like 28 356 IPR013878 -
Vifa4g05012 360 Gene3D - 32 357 IPR011989 -
Vifa4g05012 360 MobiDBLite consensus disorder prediction 1 27 - -
Vifa4g05012 360 FunFam putative MO25-like protein At5g47540 27 356 - -
Vifa4g05012 360 SUPERFAMILY ARM repeat 34 358 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g05012 Vifa-Chr4 1573122941 1573128222 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g05012 K08272 - gmx:100788031 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g05012 4 1573122941 1573128222 Vifa1g09835 1 1600387816 1600393653 PCT