Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04462 ATGGCGGAAATTCCCACTCTTGTAGTTCGAAAACCCTGTTTTGATCTTCCAACCGGTTGCCCTCAATGCCTCTCTGCATACATTTATCTCAATTTCGCTAAAATCCCCTTCCAATTGAATTTCCATCTAAACGATCCACATTCCGATAAAATTCCTTATTTTGAGATTGGTGATGACTTTGTGGCTTATGATAATGAGAATGAAGGAGTTATTCAGTGTTTGGGGAAAAATGGTGGTGTAGTTGATTTGGATAGTGAGGTTTGTTCTCTTCCTGAATGGATTGCGATTAAAGCAGTTATTACTACTTGGCTTCATGATGCACTTGTTTATGAACTTTGGGTGGGAAATAAAGGTTCTCCGGCTTATAGTATCTATTATTCTGATCTTCCTTGGCCCATTAGGAGGGTTCTTTCTTCCAAGAAAGTTCGATCGGTGAAGGTTAAACATGGGATAACTGGTGATAATGCTGTAGCCAAGAAAGAAGAGATTTATGAGAGGGCAAACTCTGCTTATGATGCTCTATCAAAATTGTTAGATGAAAAGAACTACCTATTTGGGAACAGACCATCAAGCTTGGATGCTATTTTTCTTGCACATGGACTCGTTGTTCTTCAAGCTTTACCAGAATCTTCTACGCTACGGATCAAGTTTTTGGAACATGATAATTTAGTTGGATATGTCCGAAAATGCAAGACTGAAATTATAGAAGCCGGACCCCAAATTCACACTGATGCATCATCGTCGGGTTTCAGAATTCCTTCAACTCAGAAAGGGCATAAATTTAAGAGCGCGCCGAAAAGGGAGAAGACAGATGAGGAGAAAAGGTTTAAAAGGAAGGGGAGATATTTTGTGGCAGGACAGTTGGTTGCAGTTGCTGTTTTTCTCACACTTATGATGTCATTTGATTTTGCTGAAGTGGAGCTAGAAAATGTTGACGGAGGGGATGAATAA 951 0.3975 MAEIPTLVVRKPCFDLPTGCPQCLSAYIYLNFAKIPFQLNFHLNDPHSDKIPYFEIGDDFVAYDNENEGVIQCLGKNGGVVDLDSEVCSLPEWIAIKAVITTWLHDALVYELWVGNKGSPAYSIYYSDLPWPIRRVLSSKKVRSVKVKHGITGDNAVAKKEEIYERANSAYDALSKLLDEKNYLFGNRPSSLDAIFLAHGLVVLQALPESSTLRIKFLEHDNLVGYVRKCKTEIIEAGPQIHTDASSSGFRIPSTQKGHKFKSAPKREKTDEEKRFKRKGRYFVAGQLVAVAVFLTLMMSFDFAEVELENVDGGDE 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04462 316 Pfam Glutathione S-transferase N-terminal domain 21 116 IPR012336 -
Vifa4g04462 316 MobiDBLite consensus disorder prediction 246 270 - -
Vifa4g04462 316 Pfam Glutathione S-transferase, C-terminal domain 167 229 IPR033468 -
Vifa4g04462 316 SUPERFAMILY GST C-terminal domain-like 157 231 IPR036282 -
Vifa4g04462 316 CDD GST_C_Metaxin 162 229 - -
Vifa4g04462 316 PANTHER METAXIN RELATED 10 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04462 Vifa-Chr4 1410519524 1410522747 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04462 K17776 - gmx:100807761 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04462 4 1410519524 1410522747 Vifa4g04462 4 1410519524 1410522747 ECH
Vifa4g04462 4 1410519524 1410522747 Vifa1g09001 1 1428511188 1428513841 PCT