Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09001 ATGGAGACAAACGAGAACACCCTAGTTGTTCGAAAACCCTGTTTTGGTCTTCCGGTCGGCTGTCCTCAATGTCTGTCTGCTTACATCTATCTCAAACTCTCTCAACTTCCATTCCACTTGGATTACCACCTTAACTACCCTGATTCTGATCAAATTCCTTACTTTGAAGTTGGTGATTATGTGACATATAATAATGAGAAGGGAGGGATCATTGAGGGCTTGAAAAGGGATTTAGCTGATTTAGATGTTGGTGTATCTTCACTCCCCGAATGGATACCGACCAAGGTGATGCTCACAACTTGGCTTGCTGATGCACTTGAATATGAGCTTTGGGTGGGAGGTGACGCCTCGTCGGCTTATAGGATCTATTACTCTGATCTTCCGTGGACTATAGGAAAGGTTTTGTTTTGGAAGAAAGCTCGATGGGTGAAGCATAAACACGAGATAAGTAAAGACAATGCTGAAGTAAAGGAAGAAGAGATTTATGGAAGAGCAAACTCTGCGTATGATGCTTTGTCAACTTTGTTAGGGGAAGAAAACTACTTATTTGAAAACAGGGCATCAAGCTTGGATGCTATTTTTCTTGCACATGCATTAGTAGTTCTTCAAGCTTTTCCTGAATCATCAATTTTGCGAACCAATTTTCTGAAACACGCTAATTTAGTGAGATACGTGCAACAACATAAGGAAGAACTTATAGAATCTGCTGGCACGTCTGCGTCTAATGATTCATATTTTGGTGCATCATCAACATCCGGTGGTCCTTCAACTAAAAGTTCGAAGTTCAAGAGCAAACATAAAAAAGAGAAAACAAAGGAGGAGAAGAAATATCGAAAAAGGGCGAAATATTTTGTGGTAGCTCAGCTAGTTTCAGTTGTTCTGTTTCTCAGTATCATGTCTGGATTCAGTGATGATGGCGAAGTCGAGTTAGATGACGGCGATTTAGACTATGGCTATGATGAATGA 966 0.4058 METNENTLVVRKPCFGLPVGCPQCLSAYIYLKLSQLPFHLDYHLNYPDSDQIPYFEVGDYVTYNNEKGGIIEGLKRDLADLDVGVSSLPEWIPTKVMLTTWLADALEYELWVGGDASSAYRIYYSDLPWTIGKVLFWKKARWVKHKHEISKDNAEVKEEEIYGRANSAYDALSTLLGEENYLFENRASSLDAIFLAHALVVLQAFPESSILRTNFLKHANLVRYVQQHKEELIESAGTSASNDSYFGASSTSGGPSTKSSKFKSKHKKEKTKEEKKYRKRAKYFVVAQLVSVVLFLSIMSGFSDDGEVELDDGDLDYGYDE 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09001 321 Pfam Glutathione S-transferase, C-terminal domain 165 227 IPR033468 -
Vifa1g09001 321 MobiDBLite consensus disorder prediction 244 259 - -
Vifa1g09001 321 Pfam Glutathione S-transferase N-terminal domain 22 112 IPR012336 -
Vifa1g09001 321 MobiDBLite consensus disorder prediction 244 274 - -
Vifa1g09001 321 CDD GST_C_Metaxin 160 225 - -
Vifa1g09001 321 MobiDBLite consensus disorder prediction 260 274 - -
Vifa1g09001 321 PANTHER METAXIN RELATED 8 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09001 Vifa-Chr1 1428511188 1428513841 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09001 K17776 - gmx:100811573 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09001 1 1428511188 1428513841 Vifa1g09001 1 1428511188 1428513841 ECH
Vifa4g04462 4 1410519524 1410522747 Vifa1g09001 1 1428511188 1428513841 PCT