Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04460 ATGGGATGTTCTCAATCAAAGCTAGATGATGAAGAAGCTGTTCAGATTTGTAAAGATAGAAAGAGATTCATAAAAGAAGCTGTTGAGCATAGAACTCAGTTTGCGAATGGACATGTTGCGTATATTCGGTCTCTCGAAAGGGTATCTGCTGCTTTGCTTGAGTATTTCGTCGGAGAAGAAGGACTAAAGTTTGAATTGGATTCGACCGTGACGCCGCCTGTGAAGAACGAAGCTGCTCAGGAAACAATCGAGGTTGGATCCAATAGTACAACTTTGAAAGTGAGTTACTCGAGGTCGAGTGGTAATCCGGCGATTTCGGTGGAAGAAAAGCCTATGTCGCCGGAAACAGGTCGAGTTGAGGCGTATTCTCCTCCGAGGTACCAATATGGGAATGATGGTTTTTTTGGTATGCAGGCCGCGTCTATGAATGCATCAATTTTCGCTTATTCTCCGAATAACAGGCCTGTTGTTATCCATCCGACTTCACCACCACAGTCTTCTTCTCAGTGGGATTCCTTTTGGAATCCGTTTACGTCGTTGGACTATTACTGTTACCCTAATGGATGTAGCCTTGACGAGATTGTTACGGATGCTGAGAATCGAGAACTGAGGAAAGTTCGGGAAGAAGAAGGAATACCGGACCTGGAACAGGAAGGAGAGGATACCAAAAAAGAGGGTTTTGTTAAGAGAAATGTAGCCGAAGAAAAAAACGAAATCAGCGTGAATTCCTCAAAAGAAGTCGTGGTTGAAGATGTTGGTGAACATGAGGAAGAGAAAAAGGAGGGAGCAGATGCTAAAACGGAAACTGTGCAAGTCAATGGTGGCGAGTGTTTTCAAGTATCAAAAGCTCAAACTTCGGGTCATATGGAATCTAGCCATCAAGAAATGGCAATTGATAATCAAGAAGCTAAGGAAGAAACACCAGGTTTTACTGTTTATGTAAATCGAAGACCGGCGAATATGGCAGAAGTGATCAAGGATCTTGAAGCTCAATTTGTGGTTGTATGTAATGCAGCCAACGATGTTTCAGTACTCTTAGAGGCTAAGAAAGTTCAACACTTATCCACTTATAATGAACTGTCAGCATCAAAATTGTTGAATCCTGTAGCTCTTTTTCGCTCAGCTTCTTCTAGCTCGTCCCCGTCAAAAAGTATAATGAATTTTTCAAACTCTAGGAATGAAGTTGATGATGGCACTGATGATCCTTCGTCAGGGGAAGGTTGTATGTTTTCTTCCAGTCACCAATCAACGTTAGACCGGTTATATACATGGGAGAAGAAGCTCTACCAGGAAGTTAGGTCTGGAACGCGCTTTCGACTTGCATATGAGAAGAAATGTCTGCAACTCAAGAACCATGATATAAAAGGAGAGGAACCTTCTTCTGTGGAAAAAACAAGATTAGCTATTAGAGATCTACACACTCAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCCCGGAGAATCGAAGCCTTAAGGGATGAAGAGTTGCATCCCCAGCTTCTTAAAATGTTGCAAGGGCTAGCAAAGATGTGGAAAGTGATGGCAGAATGTCATCAGACACAGAAACAAACCATGGAAGAAGTCAATATTATTCTAGACACCTTTGCTGCCAGAAAACATTCCTCCGTGTCAATAACCGATCCGCTAAAACTTGCACTCTCGGCCTCCATTCTTGAAACCGAGTTAAGGAACTGGCGAAACACTTTCGAGTCATGGATCACCTCTCAGAGATCATACATTCACGCAATAACCGGCTGGCTTCTCCGATGCATGAGATGCGAACCCGATGCATCAAAATTAATATCCTCTCCTCGAAGGTCTAGCTGCACTCATCCTTTGTTTGGACTTTGTGTTCAGTGGTCAAGACGTCTAGACACGATACAAGAAACTGCGGTGCTTGAGGGTCTAGACTTTTTCGCAGCCGGCTTAGGTTCCTTCTATGCTCAACAACTAAAAGAAGATTCTGCACAAAATGCAGTAGTAGGATCCAATGGAAATATGGAAATTGTGGAAGTTGTTAAGGTGGAAAAACAAGAAGTGGTGGAGGTTGCGGTTAAGGTACTTTGCGGTGGAATGTCGAGCGCGATGAGCTCAATGGCAGCGTTTGCTATTGATTATGCTAAGGGATACAATGATCTTGTTAAACAATGGGAGAATGGGAAGTTGCAGCAAAATTGTGAGCCTGTGAGCCTGCAAAATGAATAA 2211 0.4288 MGCSQSKLDDEEAVQICKDRKRFIKEAVEHRTQFANGHVAYIRSLERVSAALLEYFVGEEGLKFELDSTVTPPVKNEAAQETIEVGSNSTTLKVSYSRSSGNPAISVEEKPMSPETGRVEAYSPPRYQYGNDGFFGMQAASMNASIFAYSPNNRPVVIHPTSPPQSSSQWDSFWNPFTSLDYYCYPNGCSLDEIVTDAENRELRKVREEEGIPDLEQEGEDTKKEGFVKRNVAEEKNEISVNSSKEVVVEDVGEHEEEKKEGADAKTETVQVNGGECFQVSKAQTSGHMESSHQEMAIDNQEAKEETPGFTVYVNRRPANMAEVIKDLEAQFVVVCNAANDVSVLLEAKKVQHLSTYNELSASKLLNPVALFRSASSSSSPSKSIMNFSNSRNEVDDGTDDPSSGEGCMFSSSHQSTLDRLYTWEKKLYQEVRSGTRFRLAYEKKCLQLKNHDIKGEEPSSVEKTRLAIRDLHTQITVSIHSVEAISRRIEALRDEELHPQLLKMLQGLAKMWKVMAECHQTQKQTMEEVNIILDTFAARKHSSVSITDPLKLALSASILETELRNWRNTFESWITSQRSYIHAITGWLLRCMRCEPDASKLISSPRRSSCTHPLFGLCVQWSRRLDTIQETAVLEGLDFFAAGLGSFYAQQLKEDSAQNAVVGSNGNMEIVEVVKVEKQEVVEVAVKVLCGGMSSAMSSMAAFAIDYAKGYNDLVKQWENGKLQQNCEPVSLQNE 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04460 736 PANTHER UNCHARACTERIZED 1 719 - -
Vifa4g04460 736 MobiDBLite consensus disorder prediction 248 266 - -
Vifa4g04460 736 Pfam Protein of unknown function (DUF632) 321 644 IPR006867 -
Vifa4g04460 736 MobiDBLite consensus disorder prediction 374 393 - -
Vifa4g04460 736 MobiDBLite consensus disorder prediction 374 411 - -
Vifa4g04460 736 MobiDBLite consensus disorder prediction 247 267 - -
Vifa4g04460 736 MobiDBLite consensus disorder prediction 95 117 - -
Vifa4g04460 736 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04460 Vifa-Chr4 1410377939 1410380559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04460 408 715 Acyl Lipid Metabolism Gene Families AT2G27090 32.803 3.54e-47 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04460 - - gmx:100818631 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04460 4 1410377939 1410380559 Vifa4g04460 4 1410377939 1410380559 ECH
Vifa4g04460 4 1410377939 1410380559 Vifa1g08995 1 1428163111 1428166196 PCT