Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08995 ATGGGATGTTCACAATCAAAGCTGGATGATGAAGAGTCGGTTCAGCTTTGTAAAGATAGGAAGAAGTTCATCAAACAAGCTGTTGAGCAAAGGACTCGGTTCGCGACCGGTCATATAGCTTATGTTGAATCTATGAAGAGGGTTTCGGCTGCTCTGCGGGATTATATTGAAGGCGATGAGCCTCGCGAGTTTTCGTTAGATTCGGTCGTTACGCCACCTTTTACACCGGTGAAGAAGAAAACTAACCCTAGGATTGCCAATGGCAATGGTAATGGTAATGGCAATGGCTTTGTTCCTATATCGGCTAAATCGTTCGCACCATCATCGATTGAATTTGGAGTCGGGCCGAATTCTTTCACACCATCGCCGATTGAATTTGGAGTTGGACCGAATTCTACTTTGAGAATGAATTACTTTAGGCCAGGTGGTAATCCAGCGGTTTTAGTTGAGGAAAGGCCTCCATCGCCTGTGATCGCACGGATGGAAGCGTATGCTCCAATGCAGCAATATGGCGTTGATGGTTATTTTGCAATGCAATCATCACCCCCGATGAATCCGTCGATTTTTCCTTATTCTCCTCCAAATGTTAGGCCTAATATACCTCCACCTTCACCACAAAATGCTCAATGGGATTTCTTTTGGAACCCGTTTTCCTCGTTGGATTACTATGGTTATCCAAGCCGAAGTAGCCACAATCAAAACGGTATGGATGATGAATACAGAGGACTAAGACAAGTCCGAGAAGAAGAGGGGATACCAGACCTTGAAGAAGATGAAACTGAACATGAAGATTATGTTGTGAAGAGAAATGTAGTTGAAGAAAGAACTAGAAATGATATAAACCCCACTAGAAATGATATAAACCCCTCCAAAGAAGAAGTTGTAGTTGAAGATCTTGGTGACGATGACGAGGACGAGGACGAGGATGATGATGATGAGGATGATGGTGATGATAATGATGATAATGATGATGATGGAGAGGAGGATGAAGAAGTGGGGACAGACGATGAAACAGAAACTGAAACCGAAACCGAGCATCATGCCAAAGATTCACAACAAACTCATGGAAATGCAAGTTTTGAAGTGTCGAAAAATCAAGCTGCACGTCATATTGAATCCAGCCATAGAGAAATGGAAATTGGTAAACAAGAACCGAAGGACGAAATGGCAGGTTTTACGGTATATGTAAATCGAAGACCAACAAGCATGGCAGAGGTGATTAATGATCTTGAAGCTCAATTCAAAACTGTGTGCAATGCAGCCAATGATGTCTCGGTTTTGTTAGAGGCGAAGAAAGCTCAGTATTTGCTAACATCAAATGAACACTCAGCATCAAAATTATTGAATCCAGTCGCTTTGTTCCGCTCAGCTTCGCGCTCTTCTTCATCAAGATTTTTAGTGAACTCTTCAACCACCACCAGAGAGGAAAGATGTGAGGCTGGTAAGGATGTCTCGAAGGAACATTGTAGGCTTTCTGGTAGTCACCAATCTACATTGGACAAGTTAAATGAATGGGAAAAGAAGCTCTACGAAGAAGTCAAGTGTGGAGAACGAGTCCGAATCGCATATGAGAAAAAATGCAAGCAACTAAGCAACTATGAAGTAAAAGGCGAGGATCCTTCTGCAGATAAAACAAGAGCATCCATTAGAGATCTAGATACTCAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCCAGGAGAATCGAAACTCTAAGGGACGAAGAGTTGCATCCTCAACTTCTTGAATTGGTACAAGGGCTTGAAAAGATGTGGAAAGTGATGGCTGAATGTCATCAAACACAGAAGAGAACCTTAGACGAAGCTAAGATTCTTCTAGCCGGCACACCTTCTAAATCACATTCCAGAAGACAACAGCCTTCCATATCGATGACCGATCCAAATAGGCTCGCCCGATCAGCCTCAATTCTCGAAACTGAGTTACGAAACTGGCGAAACACCTTCGAGTCATGGATCACTTCTCAAAGATCCTACATTCAAGCACTAACCGGATGGCTTCTCCGGTGTGTGAGATCCGAACCCGACGACGTATCAAACTTACCACCCTACTCTCCTCAAAGGATGAGCAACACTCACCCGTTATTCGGACTCATTGTTCAGTGGTCAAGGCGTCTAGACGGAGTGCGCGAAAAGGCAGTGCTTGACGGTATGGACTTTTTTGCAGCCGGAATGGGATCCCTCTACGCACATCAATTGAGACAAGACTCGAGGTCGAGTTCATATAGAACTACAACAAATCAAAATGGCGGGAATATGGAAATGGTTGAAGTTGGTCATGTGGAAGAAGAAGAGGTTATGGCTCCTGAAAAACTTGCTGAAGTTGCTATTAAAGTGCTTTGTGCTGGAATGTCTGTTGCTATAAGCTCATTAGCAGATTTTGCTTATGATTCTGCAGAGGCTTATAGTGAAGTTGTGAAGCAATGGGAGAGTGTCAAAGGCCAAAAGCATAATAATTCTAGTGAGAATAGAACATAG 2499 0.4306 MGCSQSKLDDEESVQLCKDRKKFIKQAVEQRTRFATGHIAYVESMKRVSAALRDYIEGDEPREFSLDSVVTPPFTPVKKKTNPRIANGNGNGNGNGFVPISAKSFAPSSIEFGVGPNSFTPSPIEFGVGPNSTLRMNYFRPGGNPAVLVEERPPSPVIARMEAYAPMQQYGVDGYFAMQSSPPMNPSIFPYSPPNVRPNIPPPSPQNAQWDFFWNPFSSLDYYGYPSRSSHNQNGMDDEYRGLRQVREEEGIPDLEEDETEHEDYVVKRNVVEERTRNDINPTRNDINPSKEEVVVEDLGDDDEDEDEDDDDEDDGDDNDDNDDDGEEDEEVGTDDETETETETEHHAKDSQQTHGNASFEVSKNQAARHIESSHREMEIGKQEPKDEMAGFTVYVNRRPTSMAEVINDLEAQFKTVCNAANDVSVLLEAKKAQYLLTSNEHSASKLLNPVALFRSASRSSSSRFLVNSSTTTREERCEAGKDVSKEHCRLSGSHQSTLDKLNEWEKKLYEEVKCGERVRIAYEKKCKQLSNYEVKGEDPSADKTRASIRDLDTQITVSIHSVEAISRRIETLRDEELHPQLLELVQGLEKMWKVMAECHQTQKRTLDEAKILLAGTPSKSHSRRQQPSISMTDPNRLARSASILETELRNWRNTFESWITSQRSYIQALTGWLLRCVRSEPDDVSNLPPYSPQRMSNTHPLFGLIVQWSRRLDGVREKAVLDGMDFFAAGMGSLYAHQLRQDSRSSSYRTTTNQNGGNMEMVEVGHVEEEEVMAPEKLAEVAIKVLCAGMSVAISSLADFAYDSAEAYSEVVKQWESVKGQKHNNSSENRT 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08995 832 MobiDBLite consensus disorder prediction 296 339 - -
Vifa1g08995 832 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vifa1g08995 832 MobiDBLite consensus disorder prediction 368 385 - -
Vifa1g08995 832 MobiDBLite consensus disorder prediction 619 637 - -
Vifa1g08995 832 MobiDBLite consensus disorder prediction 353 367 - -
Vifa1g08995 832 MobiDBLite consensus disorder prediction 277 385 - -
Vifa1g08995 832 MobiDBLite consensus disorder prediction 615 637 - -
Vifa1g08995 832 Pfam Protein of unknown function (DUF632) 403 732 IPR006867 -
Vifa1g08995 832 PANTHER UNCHARACTERIZED 1 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08995 Vifa-Chr1 1428163111 1428166196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08995 1 258 Acyl Lipid Metabolism Gene Families AT2G27090 26.909 4.99e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08995 - - tpra:123884976 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08995 1 1428163111 1428166196 Vifa1g08995 1 1428163111 1428166196 ECH
Vifa4g04460 4 1410377939 1410380559 Vifa1g08995 1 1428163111 1428166196 PCT