Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04453 ATGGGTGCTTGTTATTCTTGCAATACATCCTCAATATTTAAAAACATGGTAAGAGTAGTTCATCTCAATGGTTTTGTGGAAGATTTTGACCAACCAATTTCAGCAAGCCAAGTTATTGGAAATCCACCAAAACACTTTGTTTGTACTTCAATACAGCTTCTATCATCATCTTACAAACCATTGAAAGGAGATAATAGTCAACTCCAACCTGGTCAACTGTATTTCATGCTACCATACTCAGTACTCCAAGCTGATGTTTCTCCTGTGGATTTGGCTTGCCTAGCCAAAAGGCTCACTGCAAAAGGTAAAGCCAAAAACAAACCATCTGATTACAATAAGTCTTCAAAGGCTGTTATACCATTACCTTCAAGGAGTCCTTGTAGAGTTGGTGTGGAAGAGAAAGTTATGATAAATGGAGGAAGAAGCCCTTGTAGAATGCAGTCATGGAAACCTATCTTGGAAAGTATTGCAGAGAAGTCACTCAACAGGAGAAGTGAATCAGATTTGCAAGAAAATTGTATAGTAGACTTGTATGTTTATAATGATTTTGAGTTAGGAAGCCATAATATATTTTACAATTGTTGTATCTGA 591 0.3655 MGACYSCNTSSIFKNMVRVVHLNGFVEDFDQPISASQVIGNPPKHFVCTSIQLLSSSYKPLKGDNSQLQPGQLYFMLPYSVLQADVSPVDLACLAKRLTAKGKAKNKPSDYNKSSKAVIPLPSRSPCRVGVEEKVMINGGRSPCRMQSWKPILESIAEKSLNRRSESDLQENCIVDLYVYNDFELGSHNIFYNCCI 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04453 196 Pfam PADRE domain 1 158 IPR025322 -
Vifa4g04453 196 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04453 Vifa-Chr4 1407898366 1407898956 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04453 - - cam:101506348 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04453 4 1407898366 1407898956 Vifa4g04453 4 1407898366 1407898956 ECH
Vifa4g04453 4 1407898366 1407898956 Vifa1g08945 1 1418750533 1418751084 PCT