Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04449 ATGGAGAGAAACAAGATTGTACTCACAAAGCCATTTGCAACAATAGACAAGCAATCATCAGATTCCGATGAGATGAGTTATAAGGTTCCAAATATGTTGCAGCAAGTACTAAATCTCTTTAAGAATGTGCGGTTAGGATCTGATCTCTCACGATTCAAGCTACCACCTATCTTCAACATGCCAAAGTCACAACTTCAATGGTATGAATCAGTAGTGGCATGGAGCATTTCTACTACAAGACCACAGAATTTTGGAGTTGCTCCTTACAATCCCATACTTGGTGAAACTCACCATGTTTCCAAAGGAAACCTTAACGTCTTAATTGAACAGGTTTCACACCATCCTCAAGTATCTGCATTTCATGCTACTGATCAGAAAGAAAACATAGAAATTATATTGTGCCACTATCCGGTTCCGAAGTTTGTCGGTAGTGGAGTAGAAGCTATCATGCATGGAAAACGAAAATTGCGTCTACATAATCACGGAGAGACATATGAAATGAATTGTCCTAATTTCTTATTCAGGTTTCTTCCAGTTCCTGGAATTGATTGGGTTGGCGATGTCACTATCCGGTGTCGAGAAACAAGCCTTGCAGTAGAATTGACCTACATAAGACCGTCTTTCTTTGGATTTGGAGGAAATCGAAGACAGATGAAAGGGAAGATCTTTGACTCACTCACAATGAATGTTCTTTATAAAATTGACGGCCATTGGGATAGCACTGTAACATTGAAAGATGCAAGTAATACAGAAGTAAGAGTGATATATGATGCAAAACAAGTTATATCAGGGCTCCATACTCCTTTTGTTAAGGATCCAGAGAATGTGTGGCCAACAGAATCAGCTCTTGTTTGGGGTGATTTAAGCCAAGCCATCATAAGCAATGATTGGGAGAAAGCAAGAGAAGCAAAGAAAACTATGGAGGAAACACAAAGGATTCTCCAAAGAGAAAGAGAGTCAAAAGGGGAAAGTTGGATCCCTAAACACTTTATAGTCTCTCAAAGCAATGAAGATGGTTGGGACTGTTCACCAATCCAAAAGTGGGTCCCAGATTCCCCTATCGCCACCCTTTAA 1074 0.3994 MERNKIVLTKPFATIDKQSSDSDEMSYKVPNMLQQVLNLFKNVRLGSDLSRFKLPPIFNMPKSQLQWYESVVAWSISTTRPQNFGVAPYNPILGETHHVSKGNLNVLIEQVSHHPQVSAFHATDQKENIEIILCHYPVPKFVGSGVEAIMHGKRKLRLHNHGETYEMNCPNFLFRFLPVPGIDWVGDVTIRCRETSLAVELTYIRPSFFGFGGNRRQMKGKIFDSLTMNVLYKIDGHWDSTVTLKDASNTEVRVIYDAKQVISGLHTPFVKDPENVWPTESALVWGDLSQAIISNDWEKAREAKKTMEETQRILQRERESKGESWIPKHFIVSQSNEDGWDCSPIQKWVPDSPIATL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04449 357 Coils Coil 300 320 - -
Vifa4g04449 357 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 70 330 IPR000648 GO:0008289
Vifa4g04449 357 FunFam Oxysterol-binding protein-related protein 4C 92 269 - -
Vifa4g04449 357 Gene3D - 93 265 - -
Vifa4g04449 357 SUPERFAMILY Oxysterol-binding protein-like 36 342 IPR037239 -
Vifa4g04449 357 Gene3D - 277 350 - -
Vifa4g04449 357 FunFam Oxysterol-binding protein-related protein 4B 277 349 - -
Vifa4g04449 357 Pfam Oxysterol-binding protein 71 340 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04449 Vifa-Chr4 1407499839 1407514644 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04449 K22285 - gmx:100819769 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04449 4 1407499839 1407514644 Vifa1g08944 1 1418746206 1418749461 PCT