Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04372 ATGGCGATTTCCGACGAGCCTCAACTTCTACAGAACGCCTCGATTCTCTTGCGGCGCAGACCGAGCGCCAACTCCGTCAACGGCTTGTTCGATTTGTCTTCTACCGTGGAAGGCGAGAGTTCCGGTGAGGAGTTAGTCAAGGATTCTTCTAGTTCCGACGACTCTGTCAGCGGTGATCAGAATATTGAAGGTAATCCTGATCAAAACCGAGTCAATAATGTTCCTGCAATCCAATTCACGTACCGTCCTTCTGTTCCGGCTCATCGGAAAATCAAGGAAAGTCCTCTCAGCTCCGATAACATTTTCCGTCAGAGTCACGCGGGCCTCTTCAACCTCTGTATAGTAGTCCTTGTTGCAGTGAACAGCAGACTTATCATTGAGAATATAATGAAGTATGGTTGGTTGATTAAGACTGGATTTTGGTTTAGTTCAAAATCATTGAGAGATTGGCCCCTCTTCATGTGTTGTCTTAGTCTTGCGATATTTCCTTTGGTGGCCTTTATAGTGGAAAAGTTGGCACAGCAAAAATGTATTTATGAACCAATTGCTATTCTACTTCATATAATCATTACAGCAACTGCAATTCTTTATCCCATTTTAGTAATCCTCAGGTGTGATTCAGCTTTTGTGTCAGGCGTCACATTGATGTTACTTTCTTGCATTGTATGGTTAAAACTAGTTTCTTATGCTCATACAAACTATGATTTGAGAGCACTTGCCAATTCAATTGAAAAGGGAGAAGCTCTTCCCAGTACTCTGAATATGGACTATCCATACGACGTGAGCTTCAAAAGCCTGACTTACTTTATGGTTGCTCCTACATTATGTTACCAGCCAAGATATCCTCGCACCCCTTTTATTCGAAAGGGTTGGGTGTTACGTCAATTTATCAAGCTGATAATATTTACCGGAGTTATGGGATTTATAATTGAACAATATATCAATCCTATTGTACAAAACTCCCAGCATCCTTTTGAGGGAAACCTTCTTTATGCCATCGAAAGAGTTCTGAAGCTGTCTGTTCCAAATCTATATGTGTGGCTCTGCATGTTCTACTGCTTTTTCCACCTTTGGTTAAATATACTGGCAGAGCTTCTTCGATTTGGTGATCGCGAATTTTACAAGGATTGGTGGAATGCCAGAACTCTTGAAGAGTATTGGAGGATGTGGAATATGCCTGTTCACAAATGGATGATTCGTCACCTATATTTTCCATGTTTAAGGAGTGGTATACCCAAGGGTGCTGCTGTTTTAATTGCCTTCCTGGTTTCTGCTTTGTTCCATGAGCTGTGCATTGCAGTTCCTTGCCACATATTCAAGTTGTGGGCTTTTAGTGGAATTATATTTCAGGTTCCTTTGGTCTTGATAACTAACTACCTGCAAAATAAATTCAGCAACTCAATGGTTGGAAATATGTTTTTTTGGTTCTCATTCTGTATTCTTGGTCAACCTATGTGTGTACTACTATACTACCATGACTTGATGAATAGAAAAAGCAAACTTGACCAAAGCTAG 1515 0.4079 MAISDEPQLLQNASILLRRRPSANSVNGLFDLSSTVEGESSGEELVKDSSSSDDSVSGDQNIEGNPDQNRVNNVPAIQFTYRPSVPAHRKIKESPLSSDNIFRQSHAGLFNLCIVVLVAVNSRLIIENIMKYGWLIKTGFWFSSKSLRDWPLFMCCLSLAIFPLVAFIVEKLAQQKCIYEPIAILLHIIITATAILYPILVILRCDSAFVSGVTLMLLSCIVWLKLVSYAHTNYDLRALANSIEKGEALPSTLNMDYPYDVSFKSLTYFMVAPTLCYQPRYPRTPFIRKGWVLRQFIKLIIFTGVMGFIIEQYINPIVQNSQHPFEGNLLYAIERVLKLSVPNLYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNARTLEEYWRMWNMPVHKWMIRHLYFPCLRSGIPKGAAVLIAFLVSALFHELCIAVPCHIFKLWAFSGIIFQVPLVLITNYLQNKFSNSMVGNMFFWFSFCILGQPMCVLLYYHDLMNRKSKLDQS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04372 504 MobiDBLite consensus disorder prediction 39 70 - -
Vifa4g04372 504 PIRSF Oat_dag 17 503 IPR027251 GO:0004144|GO:0019432
Vifa4g04372 504 MobiDBLite consensus disorder prediction 51 70 - -
Vifa4g04372 504 PANTHER STEROL O-ACYLTRANSFERASE 41 498 IPR014371 GO:0008374
Vifa4g04372 504 Pfam MBOAT, membrane-bound O-acyltransferase family 267 489 IPR004299 -
Vifa4g04372 504 PIRSF Oat_ACAT_DAG_ARE 11 502 IPR014371 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04372 Vifa-Chr4 1380334169 1380342127 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04372 79 501 Lipid Metabolism Gene Families AT2G19450 77.778 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04372 K11155 - gmx:732606 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04372 4 1380334169 1380342127 Vifa4g04372 4 1380334169 1380342127 ECH
Vifa4g04372 4 1380334169 1380342127 Vifa1g08753 1 1383438324 1383442754 PCT