Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08753 ATGGCTAATTCCGATGAGCCGGAAAGTACGGAAACCACCGCAACTGCCACCGTAACTACCGTTCAAACCGATTCAGATCTCAAGCATTCTTCTCTACGGCGAAGAACAAGCGCCACATCATCCGGAGGCCTTTTCGACGCCGAAAGTGCTGCTCAAGAAGCGATCAGAGATTCCGGCTCCGACGATTCGTTGAACGGAAATAACAGCGAAGAGGTCAAGGATCGAAAAACAGATCATGCAGGAATCGGTAATGACGTTCAGAATGACGTCATTGATCGGGAAAAAGTTACCGATATCAAATTTACTTACCGTCCTTCAGTTCCCGCTCACCGGAGAATCAAAGAGAGTCCTCTTAGCTCCGGCAACATTTTTAGACAGAGTCATGCAGGACTGTTCAATCTGTGTATTGTGGTGCTGGTTGCTGTAAACAGCAGGCTCATCATTGAGAATTTGATGAAGTACGGATGGTTGATTAAATCCGGCTTTTGGTTTAGCTCAAAATCGTTCAGAGATTGGCCCCTCTTCATGTGTTGTCTTAGTCTTGCAATATTTCCACTAGCTGCCTTTGTAGTCGAAAAGTTAGCACAACAAAAGAGTATTTCTGAACCAGTTGTTGTTCTACTTCATGTTGTAATTACCACAGTTGCAATTATCTATCCAGTTTTAGTAATCCTCTGGTGTGACTCTGCATTTTTATCAGGGGCCACGTTGATGCTATTAACTTGCATTGTATGGTTAAAGTTGGTGTCATATGCACATACAACCTATGATATGAGAGCTCTTACTGTTTCAAATGAAAAAGTAGCAAAGGGAGAAACAGTGCCCAATACTTTGAATATGGAGTACCCACACAATGTGAGCTTCAAGAGTTTGGCATACTTCATGGTTGCTCCTACTTTGTGCTATCAGCCAAGCTATCCTCGCACACCTTCTATTCGAAAGGGTTGGGTCTTTCGACAACTTCTCAAGCTGGTAATATTTACAGGAGTTATGGGATTTATAATAGAACAATATATGAATCCTATTGTCCAAAATTCACAACATCCTTTGAAGGGAAACCTTCTATATGCCATTGAGAGAGTTTTGAAGCTTTCTGTTCCAAACGTCTATGTGTGGCTCTGCATGTTCTACTGCTTTTTCCATCTTTGGTTAAATATACTTGCAGAGCTTCTCCGGTTTGGTGATCGTGAGTTCTACAAAGATTGGTGGAATGCCCAAACAGTTGAAGAGTATTGGAGGATGTGGAATATGGTATGTTTCCTTTTCAACCTTGGATGA 1278 0.4218 MANSDEPESTETTATATVTTVQTDSDLKHSSLRRRTSATSSGGLFDAESAAQEAIRDSGSDDSLNGNNSEEVKDRKTDHAGIGNDVQNDVIDREKVTDIKFTYRPSVPAHRRIKESPLSSGNIFRQSHAGLFNLCIVVLVAVNSRLIIENLMKYGWLIKSGFWFSSKSFRDWPLFMCCLSLAIFPLAAFVVEKLAQQKSISEPVVVLLHVVITTVAIIYPVLVILWCDSAFLSGATLMLLTCIVWLKLVSYAHTTYDMRALTVSNEKVAKGETVPNTLNMEYPHNVSFKSLAYFMVAPTLCYQPSYPRTPSIRKGWVFRQLLKLVIFTGVMGFIIEQYMNPIVQNSQHPLKGNLLYAIERVLKLSVPNVYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNAQTVEEYWRMWNMVCFLFNLG 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08753 425 MobiDBLite consensus disorder prediction 1 26 - -
Vifa1g08753 425 PIRSF Oat_ACAT_DAG_ARE 2 424 IPR014371 GO:0008374
Vifa1g08753 425 MobiDBLite consensus disorder prediction 1 84 - -
Vifa1g08753 425 PIRSF Oat_dag 1 424 IPR027251 GO:0004144|GO:0019432
Vifa1g08753 425 PANTHER STEROL O-ACYLTRANSFERASE 65 422 IPR014371 GO:0008374
Vifa1g08753 425 Pfam MBOAT, membrane-bound O-acyltransferase family 270 418 IPR004299 -
Vifa1g08753 425 MobiDBLite consensus disorder prediction 67 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08753 Vifa-Chr1 1383438324 1383442754 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08753 97 417 Lipid Metabolism Gene Families AT2G19450 76.324 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08753 K11155 - gmx:732606 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08753 1 1383438324 1383442754 Vifa1g08753 1 1383438324 1383442754 ECH
Vifa4g04372 4 1380334169 1380342127 Vifa1g08753 1 1383438324 1383442754 PCT