Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04354 ATGACAACAACTAGTAAGTTTGATCCATCTTCTAGTAGCCCAGATAGACCACTGTATACTGCACAGCGTGGATCCCACATTGCTGCTTCATTAGATAGGTCGGGTAGCTTTCGAGAATGCATGGAAAATCCAATTTTGTCTTCTCTGCCCAACATGTTGAGAAGTAGCTCTCCAGCAACGCATGGGGATGTGGAGAGCTTCTTCAATTATGTTCATTTTGATCCAAAATTGTTGGTGTTAGATCATAAATCTAATCGTCATGTGGATTACAAGAGACACGTTAATGCTGCTCTAGGAATTTCACCTGATGAATCTCCGTCTAGCTCTGCAAAAGGAAAGCTTTTGCCATCCCCAGTACCAGAAGACATCAAGCGTATGAGAGATAGTCTGTATTCAAGCACTGTGAAGGCGAGGGAACGTGGGAAAATGTTCAATGAGGCCTTATCTGTATTCAATGAAGTTTTCCCAACTGTCAATTTGAAGAAAAGATCTCGAGCTGAAAGCTTTTCCAACGATCGTTCTAGTGTCATGTTGAATGACCGCTCATCCCTGGGGCCAAGCATGGGTAAGGTTGGCGTTCAAGGTCATCCCGTCACAAGTGCTTTTGAACTAGAGCAGCAAAAGTCCGAAGAGAGAACCAAAAATTTGGTTCCAAACAAACGCACTCGTACTTCTATGGTTGATGTGAAGATGGATGTACGGACCAATTCTCTTGTTAGGCCATTAGGGGCTGTTGATAGAGATAAAGAAAAACTGCGGATTGCCAATAATGGTGTAACTCAGAGTGAGGAGCGAAACTTACCTGTTGTAGGTGATGGTTGGGAAAAGTCAAAAATGAGGAAGAAGCGATCATGCATCAAGCTAGATAGTTCTCCAAGTACTACTTTGAACAAACCTGTTAGTGGTTTCCAGGAAACAAAACAGGGAACGCAACAAAGACTTGGTACTACTGATTCTCGGTCGAAATTGAGTAACGATTCTAATACTTTTAGGCTGGGCATTTCTAATGGAACTGTTACAGCTGGCAAATCAGATGGAGTCTCTCAACAGACTGGATTGGGTATACGCGCCCCTATCCATAGAAATGACCAAGATAATAGTTCCCTTGTCAATGATAAGCGGGTTCGTCCTGTTAGTTCAGACAAGGAGAAGGTGAACTTCAGAGCTGTTAACAAGGCAACTGTTCGTGACGAATTCAATTCAGCCAGCCCTACCTCAAGTACAAAATTGAATGCTGCTATTCGGGCTCCACGATCAGGTTCAGGAGTTGCCCCCAGGTTGTCACCAGTTGTCCATAGAACAGCTGTTCCTAATGATTGGGAGCTTTCTCACTGTGCCACAAAGCCCCCAGCTGGTGTTAATAGTACTAATATTCGCAAACGTGTGACATCGGCGCGGTCATCTTCCCCACCTGTTGTCCCTTGGCAGAGGCCCCAAAAGAGCTCTCGTACTGCCAGGAGAACAAGTTTTGTGCCGATTGCTTCGAGTAATGATGAAGCTTCTGCTGTGGATGCAGTCTCCGATGTGTCTGGTAATGATATTGGTTTAGGATTTGTGAGACGCTCGGCTGGAAGTTCTCCTCAGCAAATTAAACTAAAAGGTGAACCTTCACCTTCGGCAGCTTTATCTGAAAGTGAAGAGTCCGGGGTGGCTGAGGTTAAACCAAAAGAGAAGGTCAGGAAACCAGAAGAGAGAGATCTGAAAGCTGGACAAAATGTTCCAAAGGTGTCTAACTTGGTAACTAGAAAGAGTAAGCTTGTTTCTGGGGAAGAACTTGGAGATGGCGTTCGGAGGCAAGGCAGGACCGGGCGCTGTCTCAATGCCACAAGGTCACAGAAACCAATGGCATTTGAGAAGCTTGGAAATACTGCAAAACAACTAAGGAGTGCAAGACTAGGATCTGATAAGAATGAAAGCAAAGTGGGTCGTCCACCAACAAGGAAACTTTCTGATCGCAAAGCCTATGCTCGCCAAAAGCCTACTGCCATTTGTGCAGCAGCAGATTATTTTGTTGGGTCACAAGATGGACATGGAGAGCTATTGGCTGCTGTAAAGGGTGTTATCAACTCTGCCTATACCTTCTCCAGCCCATTTTGGAAACAGATGGAGCCTTTCTTCGGTTTGATACCTGATGAAGATATTACTTACTGGAAGCAGAAGGTAAATCTTGAATCAAGCACTCAAATGGCAACTCCATTTTCTAAATATATAGATGGCGGTGAAACCATTGTTAATAGATTTGGGTGGATTGGCTGTGAAAGAGATGTCAGATCTGATGTTCAAGATAGTGCTGGTACTAATACTGAAAAATTACCACCACCCAAGGGAGATCATAAAATGGTACCTCTCTGTCAACGTCTTATAGCTGCTTTAATCTCAGAGGAAGATCGTAGTGGTGGAAATGACGATTTCAAGTTTGACGCATTTGACACTGAATCCGAGCCTGATGGAGAATTTGAATTGAATGGATTGAATCAACGCTCATTAACTAAATTTCAGTTTGCTTGTCATTCTGCTTATAATGGTTATGGGATTACTGAGAAGCCAGCACATGATGAAACTGAAAGTGATATGATTGATATTCCTAATTTTGGGTTGAATCCAAGCTTTGGCAACTCGGTAAATGGTTTTCTTCATGATAAAACCTTAATGTCTGGCTTGGCCTGTTCAGAGTTGCAATACAATAGCTTGGACATAAATGATAAGCTTCTATTGGAGCTTCAAAGTATTGGACTTGACCTAGAACCAGTGCCTGAAATGGTGCAAGAAGATGATGAAGCCATATTGGAGGATATTACTAGGTTAGAAGAGCTGTACCAAGGACAGGTTTCCAATAAGAGAAACTTGCTAGATGGATTGTTGAAATCTGCATCCGCCGCAAAAGAACTTGTAGAAAAGGATTTTGACCAACGTGCTCTTGATCAACTTGTTGTTACAGCTTATGAGAAATACACGGCTTGTCGAGGTTCTAGTGCCTCGGGTGGGAAAAATTCAAGCAACAACAAAATGGTCAAGCAAGCTGCATTGGCATTTGTTAAATGGACACTGGAGCGATACCACCAATTTGAAGATACAGGCAAGAGCTGTTTCAGCGAGCCTTTATTCAAGGATATGTTCCTTACTGCTTCCCAGCATAGTATTGTTCGGCAATCAGATGGATTGGAGGCTGATTCCTCAAAACCTTTCCTGTCTCTGGAAGCAGCGACAGCTTCCATGGGTTCACAGCAGAGCCCATCACAATATTATCAGAATATGGATAATCTGGATTTCACTTCATCAGATATGCTTCCTGCTTTAAATCATTCATCTGAACAAACCAGTGGCAAGGAAGATTTCTGGTCAAACAGGGTGAAGAAGAGAGAATTGTTCCTTGATCATGTTGGGGGTGCTCAAGGTAATTCAAGTGCTCCGGGCATTGGAAGTTCTCTAACAAGCACTGCTAAAGGAAAGAGGAGTGAGAGGGACAGAGATGGAAAGGGGCATGGCAGAGAGGTACTATCAAGAAATGGAACTACGAAAGTTGGTAGGCAGGCATCATCCAGTGCTAAAGGAGAAAGGAAAACCAAAACAAAGCCTAAACAGAAAGCAACTCAGCATTCTGTTTCTGTAAATGGTCTCCTTGGTAAGTTGTCAGAGAAACCAAAACCAGCATTGCCTTCTGTTTCAAAGTCTATTGAAAAGCCTAGTAATAGAAATGCCAAGGAAAAGGATGAGTTTGGCTTGGGTGGATTGGATGAGCCAATTGATTTGTCCAACCTGCAGCTGCCTGGAATGGACGTGCTCGGTGATCCTGGTGACCTTGCTGACCAAAGTCAAGATCTTGGTTCATGGTTGAATATTGATGACGATGGATTACAAGATCATGATGACTTTATGGGCCTTGAAATTCCTATGGATGACCTTTCAGACTTGAATATGATGGTTTGA 3927 0.4326 MTTTSKFDPSSSSPDRPLYTAQRGSHIAASLDRSGSFRECMENPILSSLPNMLRSSSPATHGDVESFFNYVHFDPKLLVLDHKSNRHVDYKRHVNAALGISPDESPSSSAKGKLLPSPVPEDIKRMRDSLYSSTVKARERGKMFNEALSVFNEVFPTVNLKKRSRAESFSNDRSSVMLNDRSSLGPSMGKVGVQGHPVTSAFELEQQKSEERTKNLVPNKRTRTSMVDVKMDVRTNSLVRPLGAVDRDKEKLRIANNGVTQSEERNLPVVGDGWEKSKMRKKRSCIKLDSSPSTTLNKPVSGFQETKQGTQQRLGTTDSRSKLSNDSNTFRLGISNGTVTAGKSDGVSQQTGLGIRAPIHRNDQDNSSLVNDKRVRPVSSDKEKVNFRAVNKATVRDEFNSASPTSSTKLNAAIRAPRSGSGVAPRLSPVVHRTAVPNDWELSHCATKPPAGVNSTNIRKRVTSARSSSPPVVPWQRPQKSSRTARRTSFVPIASSNDEASAVDAVSDVSGNDIGLGFVRRSAGSSPQQIKLKGEPSPSAALSESEESGVAEVKPKEKVRKPEERDLKAGQNVPKVSNLVTRKSKLVSGEELGDGVRRQGRTGRCLNATRSQKPMAFEKLGNTAKQLRSARLGSDKNESKVGRPPTRKLSDRKAYARQKPTAICAAADYFVGSQDGHGELLAAVKGVINSAYTFSSPFWKQMEPFFGLIPDEDITYWKQKVNLESSTQMATPFSKYIDGGETIVNRFGWIGCERDVRSDVQDSAGTNTEKLPPPKGDHKMVPLCQRLIAALISEEDRSGGNDDFKFDAFDTESEPDGEFELNGLNQRSLTKFQFACHSAYNGYGITEKPAHDETESDMIDIPNFGLNPSFGNSVNGFLHDKTLMSGLACSELQYNSLDINDKLLLELQSIGLDLEPVPEMVQEDDEAILEDITRLEELYQGQVSNKRNLLDGLLKSASAAKELVEKDFDQRALDQLVVTAYEKYTACRGSSASGGKNSSNNKMVKQAALAFVKWTLERYHQFEDTGKSCFSEPLFKDMFLTASQHSIVRQSDGLEADSSKPFLSLEAATASMGSQQSPSQYYQNMDNLDFTSSDMLPALNHSSEQTSGKEDFWSNRVKKRELFLDHVGGAQGNSSAPGIGSSLTSTAKGKRSERDRDGKGHGREVLSRNGTTKVGRQASSSAKGERKTKTKPKQKATQHSVSVNGLLGKLSEKPKPALPSVSKSIEKPSNRNAKEKDEFGLGGLDEPIDLSNLQLPGMDVLGDPGDLADQSQDLGSWLNIDDDGLQDHDDFMGLEIPMDDLSDLNMMV 1308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04354 1308 MobiDBLite consensus disorder prediction 520 571 - -
Vifa4g04354 1308 MobiDBLite consensus disorder prediction 631 654 - -
Vifa4g04354 1308 PANTHER OS05G0107300 PROTEIN 1 1308 - -
Vifa4g04354 1308 MobiDBLite consensus disorder prediction 99 119 - -
Vifa4g04354 1308 MobiDBLite consensus disorder prediction 1 22 - -
Vifa4g04354 1308 MobiDBLite consensus disorder prediction 1128 1241 - -
Vifa4g04354 1308 MobiDBLite consensus disorder prediction 1093 1110 - -
Vifa4g04354 1308 MobiDBLite consensus disorder prediction 447 487 - -
Vifa4g04354 1308 MobiDBLite consensus disorder prediction 288 348 - -
Vifa4g04354 1308 MobiDBLite consensus disorder prediction 1 19 - -
Vifa4g04354 1308 MobiDBLite consensus disorder prediction 1148 1166 - -
Vifa4g04354 1308 MobiDBLite consensus disorder prediction 1093 1112 - -
Vifa4g04354 1308 MobiDBLite consensus disorder prediction 283 348 - -
Vifa4g04354 1308 MobiDBLite consensus disorder prediction 627 654 - -
Vifa4g04354 1308 MobiDBLite consensus disorder prediction 549 570 - -
Vifa4g04354 1308 MobiDBLite consensus disorder prediction 449 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04354 Vifa-Chr4 1376413737 1376422209 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04354 - - tpra:123909683 2207.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04354 4 1376413737 1376422209 Vifa4g04354 4 1376413737 1376422209 ECH
Vifa4g04354 4 1376413737 1376422209 Vifa1g08729 1 1378775833 1378785531 PCT