Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08729 ATGGCAGCATCCACCAAGTTTGACGTATCTTCCACCAGCCCAGATAGACCTTTGTACACTGGGCAGCGAGGATCCCACGTAGCTGCTTCAATAGATAGATCAGGTAGCTTTCGTGAGAGCATAGAAAATCCAATTCTGTCTTCTCTTCCAAACATGTCGAGAAGCAGTTCTTCAGCGACTCAAGGGGATGTGATGAGCTTCTTCAGTTGTGTGCGTTTTGATCCAAAGTTAGTTGCTTTAGATCATAAGTCTAATCGTCCAATGGATTATAAACGCCATGTCAGTGCTGCTCTTGGCATTTCACTGGATGAATCTCCATCCAGTTATGCAAAAGGCAAGCAATTGACATCCATAGTACCAGAAGATATCAAAAGACTCAGGGATGGGTTACATGCTAACTTTAGGAGGGCAAGGGATCGTGCTAAAATGTTCAGTGAAGCCTTATCTAGATTCAACAAAGATTTTCCAAATATAACTTCAAAGAAGAGATCTCGAGCAGACAATTTTTCTACTGACCGTTCCGGTTTTACATTAAGTGATCGGCCAGTCTTGGGTCCCAGCATAGGTAAGGTTGGAGCTCATGGTCATGCAGTCATAGGCAGTTTCGAACATGACCAGCAAAAGTTGGAAGAAAGAACCAAAAATGCTGTTCCAAACAAGCGCACTAGAACTTCTTTGGTTGATGTCAAGATGGATGTGCGGACAAATTCACTCGTCAGGTCATCTGGGATTGTAGATAGAGAGAAGGATATTGTACGAGTTGCTAATAATAGTACAATTCAAGGTGAGGAACGGACTTTTCCCATTGGAGGTGATGGTTGGGAAAAGTCTAAAACGAGGAAGAAGCGTTCTGGCATCAAACCCGACGGGTCTCTGAGTACAACATCGGCAAAACCCGTTAACATTTTCCAGGAAACTAAGCAAGGAATGCAACAAAGACTAGCTACTGATGCACGGTCAAAACTGAGTAATGATTCTCATTCTTTCAGGTCGGGCCTTTCTAATGTAACTGCTGGAGCTGGAAAATCAGATGGCGTCTCTCAACAAGTTGGGTTGGGCACACGTGTCTCTACTCCTAGAAATGATGCCGATAGCAATTCTGCTATCAATGATAGGCGGGATCGTCCTGTTAATTCAGACAAAGAAAGGATGAATTTCAGAGCCACTAACAAGGCAACCGTCCGTGATGAATTTAATTCAACTAGCCCTAATTCATGTGCAAAATTAAATACATCTCACTACGACCAAGCCCCCTGCTGGTGTTGGCACAAGCAATCGCAAACGTGCAGCATCAGCACAATCATCTTCTCCACCTGTTGTCCCCCTGGCAGAGGCCACAAAAGAGCTCCCGCACTGCCAGAAGAGCAAGTTTTTATTCCAGTTGTTTCGAGTAATGATGATTCCCCTGTTTTGGATTCTGTATCTGATGCGTCTGGCAGTGATCTTGGGTTAGGAGTTGCCAAACGTTTGTCTGGCGGTTCTCCCCAGCAAATAAGATTAAAAGGGGATCCATCATCTTCAGCTGCCTTATCTGAAAGTGAAGAGTCAGGGGTGGCTGAGATGAAGCCTAAAGACAAGGGCAGGAAACCAGATGAGATAGACCAGAAAGCTGGACAAAATGTTCAAAAGGTTTCTAACATGGTCCCTCCAACGAAAAGAAATAAACTTGTGTCCAGGGAAGAACATGGGGACGGTGTTCGGAGGCAAGGAAGGACAGGGCGGAATTTTCCTGCTACTAGGTCATTGATGCCAATGACATCTGAGAAGCTTGGAAACATAGGGACTGTAAAGCAACTCAGAAGTTCAAGACTAGGATTTGAGAAGAGTGAAAGCAAGGCAGGTAGGCCACCAACCAGGAAACTTTCTGATCGGAAGGCATATGCTCGTCAAAAACACTCGGCTATTAGTGCATCAGCAGATTTCCTTGTTGGGCCAGAAGATGGACATGAAGAGCTATTGGCTGCTGTAAAGGGTCTTATTGACTCTGGTTGTGCTTTTTCTAGCCAATTTTGGAGGCAGATGGAGCCTTTCTTTGGTTTGATAATTGAGGAGGATATTGCTTACTGGAAACAAAAGATAAATCTTGAGTCAAGCGGATTGATGCCAACTCCAGTTTCTTCAAATATAGATGATTATGAAGCTGCTGCTAATGGGGTTGGGTTGATGGTTTGCGGAAGAGATGTTGGACCTGATGCTCAAAGGGGTGCTGGAATTGATAGCGAACAATTGCAACTAACTAAAGGGGATTGTAATGTAATTCCCCTTTGTCAAAGGCTGCTATCTGCTTTAATTTCAGAGGAGGGTTGTAGTGGAAGTGAAAATCTCAATTTTGATGCGTATGATACTCAATTTGAGACAAATGGAGAATTGGAACTGAATCATTTGGATGACCACTCACTAGCTAATTATAACTTTGCCAGTCATTCTGCTTGCAATGGTTATAGGACAACTGAGAAGCCAGAACATGATGATACTAGAAGTGATGTAGTAGATATTCCACAAAACGGGTTGCGCTCAAGCCAGAAGACGCCTATCATAACGTCTTCAGAGTTGGAATATGATGCCTTGGATATAAATGACAAAATTCTGTTGGAGCTTCAGAGCATTGGAATTTCCCCAGAACCTGTGCCCGAAATATCGCAAACAGACGATGAAGGAATTTTTGACGATATCACTAGGTTGGAAGAGAATTATCAAAGACAGGTTTCCAAGAAGAAAGGCTTGCTAGAAGGGTTATTGAAATCTGCCTCAGTGACCAAAGAATGCCAAGAAAAGGATTTTGAACAACGCGCTCTAGACAAACTCGTTGTAATGGCTTATGAGAAATACATGGCTTGTCGGGGTCGTAATCCCTCAGGTGGGAGAAATACAAGCAGCAAAGTGGCCAAGCAAGCTGCATTGGGATTTGTTAAACGGACATTGGAGCGGTACCATCAATTTGAAGATACAGGCAAGAGCTGCTTCAATGAGCTTTTATTCAAGGATATGTTCTTTGCTGCTTCTTCCCAAAGGAGTAACGTTCGGCTATTAGATGGCATGGAGGCTGAGTCCGCAAAACCACATGCTTTTTCCCGTTCTCTGGAAGCAAGAACAGGTTCCATTAGTTCACGGAGGAGCCCTGCATTTAGCCCGAACATGAATAATCACGATGTCAATTTATCAGATATTTTTCCTGTTATAAATAATTCATCTGAACAAACTAGCGGGAAGGAAGATCTTTGGTCAAACAGGGGGAAGAAAAGGGAATTGTCCCTTGACGATGTTGGCGCTTCAAGTGCTCCATCGGGCATTAGAAGTTCTCTATCAAGCAGCACAAAAGGAAAGAGAAGTGAAAGAGACAGAGATGGAAAAGGGCAGGGCAGAGAAGTGTTATCCAGAAACGGAACTACCAAAGTCGGTAGGCCCGCATTATCTAATACTAAAGGAGAAAGGAAACCAAAACCAAAGCCTAAGCAAAAAGCAGGGCAGCATTCTGTTTCTGTTAATGGCCTCCTTGGCAAGCTATCCGACCAACCTAAATCAGCATTGCCATCTGTTTCAAAATCAAATGAAATGTCTACCAATAGCAATGCCAAGGAAAATAATGAGTCTGCCATGGGTGAAGATGAACACGACGCTATAGATTTGTCCAACCTGCAACTACCTGGAATGGATGTGCTTGATGACCAAGGTCAGGATATTGGTTCGTGGTTGAATATTGATGATGATGGATTGCAAGATGATGGATTTATGGGCCTTGAAATTCCCATGGATGACCTTTCAGACTTGAACATGATGGTTTGA 3783 0.4351 MAASTKFDVSSTSPDRPLYTGQRGSHVAASIDRSGSFRESIENPILSSLPNMSRSSSSATQGDVMSFFSCVRFDPKLVALDHKSNRPMDYKRHVSAALGISLDESPSSYAKGKQLTSIVPEDIKRLRDGLHANFRRARDRAKMFSEALSRFNKDFPNITSKKRSRADNFSTDRSGFTLSDRPVLGPSIGKVGAHGHAVIGSFEHDQQKLEERTKNAVPNKRTRTSLVDVKMDVRTNSLVRSSGIVDREKDIVRVANNSTIQGEERTFPIGGDGWEKSKTRKKRSGIKPDGSLSTTSAKPVNIFQETKQGMQQRLATDARSKLSNDSHSFRSGLSNVTAGAGKSDGVSQQVGLGTRVSTPRNDADSNSAINDRRDRPVNSDKERMNFRATNKATVRDEFNSTSPNSCAKLNTSHYDQAPCWCWHKQSQTCSISTIIFSTCCPPGRGHKRAPALPEEQVFIPVVSSNDDSPVLDSVSDASGSDLGLGVAKRLSGGSPQQIRLKGDPSSSAALSESEESGVAEMKPKDKGRKPDEIDQKAGQNVQKVSNMVPPTKRNKLVSREEHGDGVRRQGRTGRNFPATRSLMPMTSEKLGNIGTVKQLRSSRLGFEKSESKAGRPPTRKLSDRKAYARQKHSAISASADFLVGPEDGHEELLAAVKGLIDSGCAFSSQFWRQMEPFFGLIIEEDIAYWKQKINLESSGLMPTPVSSNIDDYEAAANGVGLMVCGRDVGPDAQRGAGIDSEQLQLTKGDCNVIPLCQRLLSALISEEGCSGSENLNFDAYDTQFETNGELELNHLDDHSLANYNFASHSACNGYRTTEKPEHDDTRSDVVDIPQNGLRSSQKTPIITSSELEYDALDINDKILLELQSIGISPEPVPEISQTDDEGIFDDITRLEENYQRQVSKKKGLLEGLLKSASVTKECQEKDFEQRALDKLVVMAYEKYMACRGRNPSGGRNTSSKVAKQAALGFVKRTLERYHQFEDTGKSCFNELLFKDMFFAASSQRSNVRLLDGMEAESAKPHAFSRSLEARTGSISSRRSPAFSPNMNNHDVNLSDIFPVINNSSEQTSGKEDLWSNRGKKRELSLDDVGASSAPSGIRSSLSSSTKGKRSERDRDGKGQGREVLSRNGTTKVGRPALSNTKGERKPKPKPKQKAGQHSVSVNGLLGKLSDQPKSALPSVSKSNEMSTNSNAKENNESAMGEDEHDAIDLSNLQLPGMDVLDDQGQDIGSWLNIDDDGLQDDGFMGLEIPMDDLSDLNMMV 1260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 269 287 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 498 513 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 1028 1048 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 554 569 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 814 836 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 1062 1203 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 1072 1086 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 288 365 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 485 579 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 1155 1195 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 1020 1048 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 1 19 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 538 552 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 263 377 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 1 33 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 1105 1121 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 815 829 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 517 536 - -
Vifa1g08729 1260 PANTHER OS05G0107300 PROTEIN 459 1260 - -
Vifa1g08729 1260 MobiDBLite consensus disorder prediction 603 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08729 Vifa-Chr1 1378775833 1378785531 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08729 - - gmx:100812435 1719.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08729 1 1378775833 1378785531 Vifa1g08729 1 1378775833 1378785531 ECH
Vifa4g04354 4 1376413737 1376422209 Vifa1g08729 1 1378775833 1378785531 PCT