Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04327 ATGAAACCACGATCACCGAACAAAATCACCAAGAATAACGATCACCAAGCAGAATCGCCGAGAAGTAGAATTGCCGAGAAACAGAATCGCAAATCACATTTTGCTGTTTCTAAAAGGGAATGGAAAAAGAACAAGATGTTCCTAGAGCTCATTCCACCTGATGTTGAAAATGATAACAAAACCTACAATCCTGAGATTTTGACTAGTCTCAAGCGTCAATGGGCTGCAAATTTTCAGTTGAAGTATATGGGTCATAGGTCTTTCAAGAAGCCCTCACAACTGTTTGAGAGCATAGTGGTTGTTGGACTTCACCCTAATTGTGATGTTCAGACATTACATAGACAATTTGTTGATAAAAACTTTGAAGAATCGGCTAAATTGAGAAGTGCACTTGGTTGTCAGAATCAATCTCTTGTAGAACCCAATATTGAACCTCAGGTCTTGTTTGTTTATCCTCCAGAAAAATCTCTGCCTCTTAAATGCAAGGATCTTCTTTCTTTCTGTTTCCCTGGAGGCTTGGAGGTTCGAGCAGTTGAGAGAACCCCTTCTATGAGCGCGTTGAATGAAATTTTTTACGGGCAGGAACATCTTAAACAAATGGATCTGTCATTTGTATTCAGGTTGCAGGGTTCTGACAATTCAACACTTTATGGGTGTTGTGTTTTGGTTGAAGAACTAGTGCAAAAGCCCTCTGGACTGCTGTCTCTGATTTCTGACAAGCAACTATCTTACTCTTCTTTAAGACGTTACGTATTAACCACTCAGAGATGTTACTGCATCCTTTCAAGGCTTCCATTTTTCGAACTGCACTTTGGTGTATTAAATAGCATTTTCACTCAAGAAAGGTTAGAGAAGCTGACGAAAAGTGTTGAAGATTCAAATTTAGAATTTGTTGAAGGTAGCTATGACGAAGAAAACTCAGACGGAAATTCAGAAAATGTGTTGGTGAGCGATGGAATTATAGAACAAAGCTTTCATGAAAATTCATTGATTTCTCAATCAAGAGTAAGAGCATCTACATCTGAAAACATTGTTGGTGATGGTCACCCGGAGGTTGATGTAGAGCTGCAGTCATATAAGGAGAGAATCGATTATGACAGTGTTGTACCTACTGAGCATGAAACTGATAGGACAACAGCCAAAGACGAATCTGGCTCTACAATTTCTGAAGGTAGTGATAATCATCCAGAGAACCTAATAGTTGATGACGAGCTGCAGGGGAAAATCGATAATGACAGCGCTATGCCTACTGAGCATGAAACTGATTCGATAGAAGTTGAAGAACAATCTGGCCCTATAATATGTGAAGACAGTGATGATTTTTCGGAGAACCTGATGGTTGATGGAGAGCTGCAGTCTTATAAGGAGAGAATTGGTTATGACAGTGTTCTGCCTACTGAGCATGAAATTGATAGGACAGAAGTCAAAGAAGAATCTGGCACTACAATTTTTGAAGATAATGATGGCCTCCCTAAGAACCTAACAGTCGACGGTGAGCTGCAGTCTAAGAAGAGAATCGATTATGACAGTGTTGTGCCTACTGATCATGAAAACGATAGGACAGCAGCCGAAAAAGAATTTGGCCCTAAAATTTCGGAAGATAGTGATGGTCACCCAAAGATAATGATTGACGGAGAGCTGCAGTCTTATAAGGAGAGAATCGATTATGACAATGTTGTGCCCACCGAACATGAAACTGATAGGAAAACAGCCAAAGAAGAATCTGGCCCTACAATAACTGAAGATAGTGATCACTATGGAGATGCTTTTGCAACCAGTAAGGAATTAGAAGATAGTAATTTACCCAATGCTATTTTGCCCCTCCTGCATTCTTGCCAGTATGAAAGCTCTGAATCATCCTGCAGTTTTCAAGGCTCACCTTGTAAAGACAGAAATTTCAGGAGGGATATTGATGATAATGAGACAGAAGATGCATCTTTTTCTGGCCAAGAGAAGTTAAATGACTTGAATGATATTCTTGAATGGGCCGTGGAAAATGATCATGGCCCACTACAAATTATATGCGAGTATTACCGGCTAAATTGTCCTGCGAAGGGTTCAGCACTCACATTTCATCCTTTGGAGCACCTGCATCCCTTGGAATATCATAGACCAGCCGGAACAGCCCTATGTTGTACTGGTTCAATATCTGGTTTGAAAAGTTGCAGTACCGGTCCGGAGTTAGCTGATGCACATAGCACTCCCGTGGTAGAAGAGGCAACTTCGTTATCTGTATGGACTATAGCTTGCTTATGTGGTACCTTAAGACTTGAAAATGTATTAACCGTCTTAGCAGGAGTTCTGCTGGAAAAGCAGATAATTGTTGCCTGTTCTAATTTGGGAGTCCTATCTGCTTCAGTTTTATCAGTTATTCCGCTAATCCAGCCTTACCGATGGCAAAGCCTGCTAATGACAGTTTTACCAAATGACATGCTTGATTTTTTAGATGCACCTGTCCCTTATATTGTTGGTATCAAGAACAAGATCAGTGAAGTCCAGTCAAAGTTTACCAATGTTATTGTGGTTGATGCCAACAGAAACCAGGTGAAATCGCCAACAATACCACAACTACCAAGACAAAAAGAGCTAATATCTTCTTTACGCCCTTATCACGACACTCTTGTAGGAGAAAGTTACTTGGGAAAGAGAAGGCCAGTGTATGATTGCACAGAATCGCAGATTGGAGCTGCCAAGGGGTTCCTTTCGGTGTTGCGGTCTTATCTGGACTCTCTTTGCTATAACATCCGCTCTCACACAATTACCAATGTACAATCAAACGACGATAAGATATCTTTGCTTTTGAAGGAGAGTTTCATCGGCTCATTCTCATATCGCGATCAGCCTTTCATGAAGCTTTTCGTCGATACACAGCTTTTTTCTGTACACACAGACATTATGCTCTCTTCTTTACAAAAGGAATAG 2922 0.4062 MKPRSPNKITKNNDHQAESPRSRIAEKQNRKSHFAVSKREWKKNKMFLELIPPDVENDNKTYNPEILTSLKRQWAANFQLKYMGHRSFKKPSQLFESIVVVGLHPNCDVQTLHRQFVDKNFEESAKLRSALGCQNQSLVEPNIEPQVLFVYPPEKSLPLKCKDLLSFCFPGGLEVRAVERTPSMSALNEIFYGQEHLKQMDLSFVFRLQGSDNSTLYGCCVLVEELVQKPSGLLSLISDKQLSYSSLRRYVLTTQRCYCILSRLPFFELHFGVLNSIFTQERLEKLTKSVEDSNLEFVEGSYDEENSDGNSENVLVSDGIIEQSFHENSLISQSRVRASTSENIVGDGHPEVDVELQSYKERIDYDSVVPTEHETDRTTAKDESGSTISEGSDNHPENLIVDDELQGKIDNDSAMPTEHETDSIEVEEQSGPIICEDSDDFSENLMVDGELQSYKERIGYDSVLPTEHEIDRTEVKEESGTTIFEDNDGLPKNLTVDGELQSKKRIDYDSVVPTDHENDRTAAEKEFGPKISEDSDGHPKIMIDGELQSYKERIDYDNVVPTEHETDRKTAKEESGPTITEDSDHYGDAFATSKELEDSNLPNAILPLLHSCQYESSESSCSFQGSPCKDRNFRRDIDDNETEDASFSGQEKLNDLNDILEWAVENDHGPLQIICEYYRLNCPAKGSALTFHPLEHLHPLEYHRPAGTALCCTGSISGLKSCSTGPELADAHSTPVVEEATSLSVWTIACLCGTLRLENVLTVLAGVLLEKQIIVACSNLGVLSASVLSVIPLIQPYRWQSLLMTVLPNDMLDFLDAPVPYIVGIKNKISEVQSKFTNVIVVDANRNQVKSPTIPQLPRQKELISSLRPYHDTLVGESYLGKRRPVYDCTESQIGAAKGFLSVLRSYLDSLCYNIRSHTITNVQSNDDKISLLLKESFIGSFSYRDQPFMKLFVDTQLFSVHTDIMLSSLQKE 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04327 973 MobiDBLite consensus disorder prediction 370 398 - -
Vifa4g04327 973 Gene3D - 82 296 - -
Vifa4g04327 973 ProSiteProfiles Tripartite DENN domain profile. 564 973 IPR037516 -
Vifa4g04327 973 Gene3D - 743 909 IPR043153 -
Vifa4g04327 973 MobiDBLite consensus disorder prediction 1 34 - -
Vifa4g04327 973 MobiDBLite consensus disorder prediction 7 34 - -
Vifa4g04327 973 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 21 963 - -
Vifa4g04327 973 Pfam DENN (AEX-3) domain 747 845 IPR001194 -
Vifa4g04327 973 SMART DENN_cls 253 847 IPR001194 -
Vifa4g04327 973 SMART uDENN_cls 91 224 IPR005113 -
Vifa4g04327 973 Pfam uDENN domain 145 222 IPR005113 -
Vifa4g04327 973 MobiDBLite consensus disorder prediction 562 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04327 Vifa-Chr4 1367183909 1367194952 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04327 - - mtr:25494181 1383.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04327 4 1367183909 1367194952 Vifa4g04327 4 1367183909 1367194952 ECH
Vifa4g04327 4 1367183909 1367194952 Vifa1g08692 1 1371632630 1371644419 PCT