Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04202 ATGTTTAGATTAAAGAAAAGTGAAAATTTTGCAAGGTTTTTGTATCAGAAAACTCTGCAAAATATGGCTTATTCAATAGGCTATGATCCCTGTTCCCATTTGAGCAAGGCTAATGCGAGGTCTCGTGGCTTTGCGTCGGATTTGGAAAAAGGGAGTTCTGTTGGAGGTGATGCTACTCTTGTTAAAGTTGATGATGGGGGACTAAATGGAAGTCCTGATATGCCTCGTTGTTTCCGGGATCGACGTTTGTCTGAGAAAGTTGTTGTTGCTGTTGATGTGGATGAGGTACTGGGAAACTTTGTGTCGGCTCTCAACAAGTATATTGCAGATCAATATTCATCAAATTATTCAGTTTCTGAATATCATGTGTACGAATTCTATAAGATATGGAACTGTTCGCGTGATGAAGCTGATATTCGCGTTCACGAGTTTTTTAAGACGCCATATTTCAAGTCAGGGATTCACCCTCTCCCAGGTGCTCAGATGGCAGTTCAAAAGTTATCAAGATTTTTTAACCTAGCAGTTGTAACGTCTCGGCAGAATGTAATTAAGGATCACACAATTGAATGGATAGAGAAGAATTTCCCAGGACTGTTTCATGAGATTCACTTTGGTAATCACTTTGCTCTTGATGGAATATCAAGACCAAAATCAGAGATTTGTAGGTCTTTAAATGCCAAGGTTCTTATCGATGATAACCCGCGGTATGCCATAGAGTGTGCTGATGTTGGAATTAAAGTCCTACTTTTTGATTATGAAAACTCGTATCCTTGGTCCAAGAACGAGTTAGTTGATGAGCACCCTTTGGTGACCAAAGTTAAGAACTGGAAAGAAGTGGAACAACAATTGATGTCACTGGTAGCTTCATAG 870 0.3966 MFRLKKSENFARFLYQKTLQNMAYSIGYDPCSHLSKANARSRGFASDLEKGSSVGGDATLVKVDDGGLNGSPDMPRCFRDRRLSEKVVVAVDVDEVLGNFVSALNKYIADQYSSNYSVSEYHVYEFYKIWNCSRDEADIRVHEFFKTPYFKSGIHPLPGAQMAVQKLSRFFNLAVVTSRQNVIKDHTIEWIEKNFPGLFHEIHFGNHFALDGISRPKSEICRSLNAKVLIDDNPRYAIECADVGIKVLLFDYENSYPWSKNELVDEHPLVTKVKNWKEVEQQLMSLVAS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04202 289 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 87 283 IPR010708 GO:0008253|GO:0009264
Vifa4g04202 289 SUPERFAMILY HAD-like 80 284 IPR036412 -
Vifa4g04202 289 PANTHER NUCLEOTIDASE YQFW-RELATED 36 288 - -
Vifa4g04202 289 Gene3D - 138 286 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04202 Vifa-Chr4 1338102835 1338105489 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04202 - - tpra:123907167 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04202 4 1338102835 1338105489 Vifa4g04202 4 1338102835 1338105489 ECH
Vifa4g04202 4 1338102835 1338105489 Vifa1g08518 1 1343875591 1343877661 PCT