Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08518 ATGGTTCATTTGATAAACTATGATCCTTGTTCCTATTTCACCAGAGGTTTTTGTCAATACCCTTGTTATTCTGAGGTTAAGAGATGTGTTAGGTTTAATCTTAAAGCCTGTTTTGATAGTTGCAATTATGGGAATGATAATGTTCATGACAAAAGGATGTTTTTGAAGGAAAAGAAAAATGGGAATTCTAGTAATGTTGAGCATAGATTGCAAGGTGGATGTCATAATAAGCCTTTTTGTTTCCCTGATTATCGGTTTTCGCAGAAAATTGTAGTTGCTGTTGATGTTGATGAAGTGTTAGGAAACTTTGTGTCGGCTCTGAACAAGTTCATAGCAGATCGATACTTGTCGAATTATTCAGTTTCGGAGTATCATGTCTACGAGTTCTTCAAGATATGGAACTGTTCACGAGACGAAGCTAATAGTCGTGTTCATGAGTTTTTCGAGACACCATATTTCAAGTCGGGGATCCAACCTCTACCGGGTGCTCAAATGACCCTGCAGAAATTATCAAGATTTTGCAACCTATCAGTTGTAACATCTCGGCAGAATGCAATCAAGGATCATACACTTGAGTGGTTAGAGAATAACTTTTCAGGTTTGTTTGATGAGATTCACTTTGGAAACCATTTTGCTCTTGATGGAGGGTCAAGGCCAAAGTCAGAGATTTGTAGGTCTTTAAATGCGAAGGTTCTTATTGACGATAACCCGAGATACGCAATCGAGTGTGCTGAAGCTGGTATTCAAGTCCTACTTTTCGATTACGAAAACTCGTATCCTTGGTCTAAGACTGAGTTTGCCGAGAAGCATCCTCTGGTGCACAAAGTTGAGAATTGGGAGGAAGTTGAACAAGAACTAATGTCACTGATAGTTTCATAG 879 0.3879 MVHLINYDPCSYFTRGFCQYPCYSEVKRCVRFNLKACFDSCNYGNDNVHDKRMFLKEKKNGNSSNVEHRLQGGCHNKPFCFPDYRFSQKIVVAVDVDEVLGNFVSALNKFIADRYLSNYSVSEYHVYEFFKIWNCSRDEANSRVHEFFETPYFKSGIQPLPGAQMTLQKLSRFCNLSVVTSRQNAIKDHTLEWLENNFSGLFDEIHFGNHFALDGGSRPKSEICRSLNAKVLIDDNPRYAIECAEAGIQVLLFDYENSYPWSKTEFAEKHPLVHKVENWEEVEQELMSLIVS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08518 292 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 90 256 IPR010708 GO:0008253|GO:0009264
Vifa1g08518 292 Gene3D - 112 289 IPR023214 -
Vifa1g08518 292 PANTHER NUCLEOTIDASE YQFW-RELATED 45 291 - -
Vifa1g08518 292 SUPERFAMILY HAD-like 77 287 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08518 Vifa-Chr1 1343875591 1343877661 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08518 - - aprc:113852922 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08518 1 1343875591 1343877661 Vifa1g08518 1 1343875591 1343877661 ECH
Vifa4g04202 4 1338102835 1338105489 Vifa1g08518 1 1343875591 1343877661 PCT