Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03951 ATGGATGCTACCTCACAACCATTGAAGTATCAGACATGGTTCTTGAAAGTTTCTATCCATTGTGAAGGTTGTAAAAGAAAAGTAAAGAAAGTTCTCCAGAACATTGATGGAGTATTTACTACAGCAATTGATCCACAACAGCAGAAAGTAACAGTCACAGGAAATGTTGCTGTTGAGACTCTGATAAGAAAACTGGCCAAAGCTGGAAAACATGCTGAGGTTTTGCCGGTGAATCTTCCTGCAAAAGGAAAAGATTCCAACAAAGCTAAGAACAGTAACAAGAGTGAACAAAGAGACAAAGAAGCTTCTGCAAATAGTACTGAATCCAACCATAGTTCTTCTGTCAAAGACAGGGAAGTTGAAAATGCTCAAAAGTGCAACGGTGAAAAAAACAGTAGTAACACAAAAACTAAAGGGTCGCCGGAAAAGTCTCCGGCAAGTGGTAAGGGACAGGAAAAACACAACAAAGGAGGAGAGGATTCTGTGATGATGAAGAAGAAGATGAAAAAAGTTCAGAATGGTAGTGAAACTGGTACTAGAACTAGAACCAGAAACAGTGGGTTGAGTTCAGCATCTAATGGTGCACATGCACACACAGGATCAGAATTCCATTGTCCAGGTAAGGTTGTGGGGCAAGTGAATCTCAGCCCTACACGTCAGCAACCGTACATGTTGTATCCAGAAACGTGTTATCCTCCTTTGGTACAACAATATGCAGCATACAACAGATTATGTCCCATGGGAACAATGGATTGTCCTTCTTACTATGTTCCACCATTGTCCTACCTGTGTTCAGGCCTTGATCGTGACTCTTATCAGTTTCAATCTACACCGTTGATTCCTTTTGAGTTTTTTAGTGATGAAAATGCAAATGGGTGTTCTATTATGTGA 891 0.4052 MDATSQPLKYQTWFLKVSIHCEGCKRKVKKVLQNIDGVFTTAIDPQQQKVTVTGNVAVETLIRKLAKAGKHAEVLPVNLPAKGKDSNKAKNSNKSEQRDKEASANSTESNHSSSVKDREVENAQKCNGEKNSSNTKTKGSPEKSPASGKGQEKHNKGGEDSVMMKKKMKKVQNGSETGTRTRTRNSGLSSASNGAHAHTGSEFHCPGKVVGQVNLSPTRQQPYMLYPETCYPPLVQQYAAYNRLCPMGTMDCPSYYVPPLSYLCSGLDRDSYQFQSTPLIPFEFFSDENANGCSIM 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03951 296 ProSiteProfiles Heavy-metal-associated domain profile. 10 73 IPR006121 GO:0046872
Vifa4g03951 296 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 4 296 - -
Vifa4g03951 296 Pfam Heavy-metal-associated domain 17 71 IPR006121 GO:0046872
Vifa4g03951 296 SUPERFAMILY HMA, heavy metal-associated domain 9 75 IPR036163 GO:0046872
Vifa4g03951 296 Gene3D - 9 74 - -
Vifa4g03951 296 MobiDBLite consensus disorder prediction 76 203 - -
Vifa4g03951 296 FunFam Copper transport protein ATOX1 9 78 - -
Vifa4g03951 296 CDD HMA 15 73 IPR006121 GO:0046872
Vifa4g03951 296 MobiDBLite consensus disorder prediction 87 105 - -
Vifa4g03951 296 MobiDBLite consensus disorder prediction 147 173 - -
Vifa4g03951 296 MobiDBLite consensus disorder prediction 126 144 - -
Vifa4g03951 296 MobiDBLite consensus disorder prediction 174 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03951 Vifa-Chr4 1265004395 1265005614 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03951 - - tpra:123882121 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03951 4 1265004395 1265005614 Vifa1g09294 1 1471826702 1471827937 PCT