Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa4g03947 | ATGGACTACAAAACTTTACAACTCAATCTCTCATCAGCAAAAGATCTCAACAACGTTAACCTCTTCTCCAAAATGCAAGTTTACGCCGTCGTTTCAATCTCCGGCGACCCGGTCAATAACCAAAAGACTAAAACACCTCTTGACAGAGAAGGAGGCGCTAACCCTGCTTGGAATTTCTCCGTTAAGCTCACATTCAATGAATCTCTCGCTCGCCAGAATCGTTTGACTCTCGAAATCAACCTTCGTTGTCCCGGCAGCCTCGCCATCGATAAAGACGTGGGTAGCGTCCAAGTTCCTCTCGGTGAGCTTCTCAAACAGACTGGTGACGGGAAAACCTTCCAACATGTTAGTTACCAAGTTAGAAAACCGTCTGGAAAACCAAAAGGTTCCTTTAGTTTTTCTTACAAATTCACTGAGCCGGTGAACCACTATCATAAGGTGGAACCTGTTATGGTTACGGGTTATCCTTCTCCGGCGGTGGGGTCAGCTTCTGCACCTTATCCTATTGTGTATCCTCCTCCTCCGACTCAGCCGCAATATCCGACCGAATATACGTATCCGTCGCCTTCACCGTTGTACGGTGAGTATCAACAAACTCCGGTTAATTATTTTTATCCGCCACAGAACGGCTATGTGTACCCGCCTCCACAGGGAGTACCTGTTGTAAATAGTCATTTTTAA | 681 | 0.4626 | MDYKTLQLNLSSAKDLNNVNLFSKMQVYAVVSISGDPVNNQKTKTPLDREGGANPAWNFSVKLTFNESLARQNRLTLEINLRCPGSLAIDKDVGSVQVPLGELLKQTGDGKTFQHVSYQVRKPSGKPKGSFSFSYKFTEPVNHYHKVEPVMVTGYPSPAVGSASAPYPIVYPPPPTQPQYPTEYTYPSPSPLYGEYQQTPVNYFYPPQNGYVYPPPQGVPVVNSHF | 226 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa4g03947 | 226 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 4 | 140 | IPR035892 | - | |
| Vifa4g03947 | 226 | SMART | C2_3c | 5 | 112 | IPR000008 | - | |
| Vifa4g03947 | 226 | Gene3D | C2 domain | 4 | 139 | IPR035892 | - | |
| Vifa4g03947 | 226 | PANTHER | INGRESSION PROTEIN FIC1 | 4 | 178 | - | - | |
| Vifa4g03947 | 226 | Pfam | C2 domain | 5 | 113 | IPR000008 | - | |
| Vifa4g03947 | 226 | CDD | C2_SRC2_like | 5 | 133 | IPR044750 | GO:0006952 | |
| Vifa4g03947 | 226 | ProSiteProfiles | C2 domain profile. | 1 | 113 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vifa4g03947 | Vifa-Chr4 | 1263627017 | 1263627697 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa4g03947 | - | - | psat:127073312 | 362.459 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vifa4g03947 | 4 | 1263627017 | 1263627697 | Vifa4g03947 | 4 | 1263627017 | 1263627697 | ECH | |
| Vifa4g03947 | 4 | 1263627017 | 1263627697 | Vifa1g09285 | 1 | 1469505813 | 1469506739 | PCT |