Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03316 ATGAGCAAGGGTCCTGGTGTATATTCAACTATTGGTGATAAGGCCAAAGATGTTCTCTACAAGGACTATGCTCAGCAATCACCAATTCACTTTCACTACAAATTCATGGATTGGAATGCAGGCTTTGCTTGTAAAGTTGTAGAAATTGTACCAGGATTCAGGACAGTTTTCAAATGTACCGTACCAGATTCAGGGAAGGTAGAACTACAATATGTGAATAGATTCACTGGGATTAGTGGATGCATTGGATTATTAGGAAGCGAAGAAGGACAATATGAACCTGTTCTAAACTTCTCCGGCCTTCTAGGAACAAGCATTCTGTCCCTGGGAGCCAATGTTGCGTTCCACATACCAACAAGATCAATAACCAAGCTCAATGCTGGTTTCGGCTTCAACAGTGCTTTCCTTGAAGCTTCATTGACCTTGCATGACAGCTTCGACACTGTAAAAGCGACCTTTTATCATCAAGTGAATCCCCTAACCCAGACTGCCATTGCAACACAGGTGAAGCATAGCTTGTCGCTCAAGGAAACTGGTGTCAACATTGGTGTTCAGCATGCGTTCTTTCCGGAAACGCTGTTAAAGGCTCGGTTTGACAGCTCTGGCAAGGCAGGTACTCTTATTCAACAAGGGTTTTGGCAGAAGTTTTTTGTAACTATGGCTGGTGAAATTGATTTCGGGGCCGAAGATAAAACTCCAAAGTTTGGAGTTTCCATGGCTCTAAGACCCTAG 732 0.4344 MSKGPGVYSTIGDKAKDVLYKDYAQQSPIHFHYKFMDWNAGFACKVVEIVPGFRTVFKCTVPDSGKVELQYVNRFTGISGCIGLLGSEEGQYEPVLNFSGLLGTSILSLGANVAFHIPTRSITKLNAGFGFNSAFLEASLTLHDSFDTVKATFYHQVNPLTQTAIATQVKHSLSLKETGVNIGVQHAFFPETLLKARFDSSGKAGTLIQQGFWQKFFVTMAGEIDFGAEDKTPKFGVSMALRP 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03316 243 Gene3D Porin 3 242 IPR023614 -
Vifa4g03316 243 Pfam Eukaryotic porin 50 236 IPR027246 GO:0005741|GO:0055085
Vifa4g03316 243 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 46 243 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03316 Vifa-Chr4 1040049880 1040051273 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03316 K15040 - gmx:100787061 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g05829 1 912822575 912825899 Vifa4g03316 4 1040049880 1040051273 ECH
Vifa4g03316 4 1040049880 1040051273 Vifa4g03316 4 1040049880 1040051273 ECH