Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05829 ATGGCGAAGGGTCCAGGTCTCTACTCTGACATCGGCAAGAAAGCCAGAGATCTTTTGTTCAAGGATTACAACACTGACCAGAAGTTTACTCTCACTACTTATTCACCTAATGGAGTTGCTATAACCACCTCAAGTACCAAAAAGGGTGAGGTTTTTGTGGCTGATGTTAACACGCAGTTGAAGCACAAGAATGTAACTACTGATGTCAAAGTGGACACAGCTTCTAATCTCTTCACAACAATCACTGTTACCGAGGCAGCTCCTGGCCTCAAGGCTATTCTTAGCTTCAGAGTTCCTGAACAAAGGTCTGGAAAGGTGGAAGTTCAGTACTTGCATGACTATGCAGGAGTTTCCGCAAGCGTTGGTTTGACAGCAAACCCAATTGTCAACCTCTCTGGTGTTATTGGAACTAATGTAATTGCTCTCGGCCATGATCTTTCTTATGATACAAAAACTGGCGAGTTAACAAAGTTTAATGTTGGTTTGAACTTCACCAAAGACGATTTGGTTGCTTCAGTGGTTCTGAATGAGAAAGCTAATGTCCTGAATGCTTCATACTACCATGTAGTCAACCCCTTTACCAAAACAGCTGTTGGTGCTGAGGTAGCTCACCGATTCTCAACCAAAGAGAACACACTCACACTTGGAACTCAGCATGCATTAGATCCATTGACCACTGTGAAAGCTCGATTCAACAACTTCGGAAAGGCAAGCGCTCTTATCCAGCACGAGTGGCGTCCAAAATCATTGTTGACGATTTCTGCTGAGGTGGACACCAAGGCAATTGAGAAGAGTGCAAAGGTTGGATTATCTTTGGCTCTCAAACCTTGA 831 0.438 MAKGPGLYSDIGKKARDLLFKDYNTDQKFTLTTYSPNGVAITTSSTKKGEVFVADVNTQLKHKNVTTDVKVDTASNLFTTITVTEAAPGLKAILSFRVPEQRSGKVEVQYLHDYAGVSASVGLTANPIVNLSGVIGTNVIALGHDLSYDTKTGELTKFNVGLNFTKDDLVASVVLNEKANVLNASYYHVVNPFTKTAVGAEVAHRFSTKENTLTLGTQHALDPLTTVKARFNNFGKASALIQHEWRPKSLLTISAEVDTKAIEKSAKVGLSLALKP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05829 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
Vifa1g05829 276 ProSitePatterns Eukaryotic mitochondrial porin signature. 219 241 IPR001925 GO:0005741|GO:0008308|GO:0098656
Vifa1g05829 276 FunFam Outer mitochondrial membrane protein porin 1 275 - -
Vifa1g05829 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
Vifa1g05829 276 Gene3D Porin 1 275 IPR023614 -
Vifa1g05829 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05829 Vifa-Chr1 912822575 912825899 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05829 K15040 - gmx:100802449 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g05829 1 912822575 912825899 Vifa1g05829 1 912822575 912825899 ECH
Vifa1g05829 1 912822575 912825899 Vifa4g03316 4 1040049880 1040051273 ECH