Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03037 ATGTTCACCGCAACCAAAGTAGCTTTCACATTAACACCCCCTCGTCCATGTTCTACACCTCCCCCAACACCTTTCGTTCCTATCTCTTCTTCTCTTTCTCGTCCTCACCTCATTCACTTCAATTCCCGTCGATTATGCCTTCGCCGGAGACTTTTTCTACTTTCTCCCAAAGCCACCGCAGATCAACAAGGGAAGGTTGAAGAATTTGAAGGAGAAGCTGTTGATAGTAATGTCCTTCCGTATTGTAGCATAGATAAAAAAGAAAAGAAATCCGTCGGTGAACTCGAGCAAGAGTTTCTTCAAGCGCTCCAATCATTCTATTATGAGGGAAAGGCGATTATGTCAAATGAAGAATTTGATAATCTCAAGGAAGAACTCATGTGGGAAGGAAGCAGTGTTGTTATGCTAAGTTCGGATGAACAGAAATTTCTTGAAGCCTCGATGGCGTATGTGTCTGGAAATCCAATTTTGAATGACAAAGAGTATGATGACTTGAAAATGAGGCTAAAGAGGGAAGGGAGTGAAATTGTTGTTGAGGGTCCAAGGTGCAGTCTTCGAAGTAAAAAGGTTTACAGTGACCTTTCTGTTGACTATTTAAAGATGTTTCTGCTGAATGTCCCAGCCACTGTGATTGCATTAGGATTGTTCTTCTTCCTTGATGATCTGACTGGATTTGAAATCACTTACTTGCTAGAGCTTCCGGAGCCTTTTAGTTTCATTTTCACTTGGTTTGCGGCTGTTCCTCTCATTGTATATCTAGCTCTATCACTAACAAGGGCCATTATAAAAGATTTTGTAATTCTAAAGGGTCCCTGTCCGAACTGCGGAACTGAAAATACCTCCTTCTTTGGGACTATACTGTCAATTTCAAGTGGTGGTTCCAACAACAAAGTCAAATGCTCTGAATGTGCAACTGAATTGCCTAAGTGGAGGTATCCTGGAACTATATTCATTGTTCAAGCAATGGGAGCTCATCAATAG 981 0.4139 MFTATKVAFTLTPPRPCSTPPPTPFVPISSSLSRPHLIHFNSRRLCLRRRLFLLSPKATADQQGKVEEFEGEAVDSNVLPYCSIDKKEKKSVGELEQEFLQALQSFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGNPILNDKEYDDLKMRLKREGSEIVVEGPRCSLRSKKVYSDLSVDYLKMFLLNVPATVIALGLFFFLDDLTGFEITYLLELPEPFSFIFTWFAAVPLIVYLALSLTRAIIKDFVILKGPCPNCGTENTSFFGTILSISSGGSNNKVKCSECATELPKWRYPGTIFIVQAMGAHQ 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03037 326 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 30 307 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03037 Vifa-Chr4 978741388 978744563 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03037 - - lja:Lj4g3v1327580.1 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03037 4 978741388 978744563 Vifa4g03037 4 978741388 978744563 ECH
Vifa4g03037 4 978741388 978744563 Vifa1g07816 1 1220463918 1220465832 PCT