Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07816 ATGGCTAGCAAATTATTAGCCTTCACATTGACATGTCCATGTCCATTCACTGTCTCTCCAACATTCTTATCATCCACTTCTGCTTCTAGACTCCATCATCCTATTCGATTCAATGCCGGCCGCCACTCTTGCCTTCGCCGCCGCCTATTCGAGTTTTCCCCCAAGGCCACCTCCGAACAACAGGAAGATACTGTTGTTGATAGTAAAATCTTACAGTACTGCAGCATAGACCAAAAAGAAAAGAAATCAATCGGTGAACTTGAACAAGAATTTCTTCAAGCACTTCAAGCTTTCTACTACGAGGGAAAGGCAATTATGTCGAACGAAGAATTCGATAATCTCAAAGAAGAACTCATGTGGGAAGGAAGCAGCGTTGTAATGCTAAGTTCTTCTGAGCAGAAATTTCTTGAAGCGTCTATTGCTTATGTGTCTGGAAATCCAATCTTGACTGATAAAGAGTTTGATGAATTAAAACTCAAGCTAAAGATGGAAGGGAGTGAAATTGTGGCTGAAGGTCCCCGGTGCAGTCTTCGTAGTAGAAAGGTTTATAGTGACCTTACTGTTGACTATTTCAAGGCATTGTTACTGAAAGTTCCAGCAACTGTGGTTGCATTAGGATTGTTCTTCTTTCTTGATGATGTAACTGGATTTGAGATTAATTATCTGATAGCGATTCCAGAACCTTTCAGTTTCATTTTGACTTGGTTTGCTGCTGTTCCTTTCATTCTGTGGTTAGCACAGTCAATTACAAATGCAATCATAAAAGATTTCTTGATTCTGAAGGGTCCATGTCCTAATTGTGGTACTGAAAACACCTCATTCTTTGGGACAATATTGTCAATTTCAAGTGGTGATTCAACCAACAAAGTCAAATGTGAGAACTGTGCAACTGTGATGGTATATGATTCAACTACAAGGTTGATAACATTGGCAGAAGGAAGTAATGCATAA 951 0.3964 MASKLLAFTLTCPCPFTVSPTFLSSTSASRLHHPIRFNAGRHSCLRRRLFEFSPKATSEQQEDTVVDSKILQYCSIDQKEKKSIGELEQEFLQALQAFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSSEQKFLEASIAYVSGNPILTDKEFDELKLKLKMEGSEIVAEGPRCSLRSRKVYSDLTVDYFKALLLKVPATVVALGLFFFLDDVTGFEINYLIAIPEPFSFILTWFAAVPFILWLAQSITNAIIKDFLILKGPCPNCGTENTSFFGTILSISSGDSTNKVKCENCATVMVYDSTTRLITLAEGSNA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07816 316 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 18 306 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07816 Vifa-Chr1 1220463918 1220465832 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07816 - - psat:127095131 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07816 1 1220463918 1220465832 Vifa1g07816 1 1220463918 1220465832 ECH
Vifa4g03037 4 978741388 978744563 Vifa1g07816 1 1220463918 1220465832 PCT