Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03003 ATGGAGTGGTCTGCTTGTACGGACGAGTACGAGAAGCTTGTTTTTCGCATGAGCACTCCCAGGGTTGTTATTGACAATGCCGTTTGCTCCAATTCAACTATAGTCAAGTTTGATAGTGCTAGAAAGCATGGAATTCTTTTGGAAGCGGTACAGATTCTCAGCGATCTAAACCTTTTCATTAAGAAAGCATATGTTTCCTCTGATGGAAGATGGTTTATGGATGTTTTTCATGTTACGGATCAAGATGGAAATAAGTTAACAGATGAAAGTGTTTTGAAGTATATTGAACAGTCACTTGGTAGCATTTATAATGGAAAAACCAATCATAGAAATGGTCTCACTGCCTTGGAATTAAAGGGCACGGACCGTGTTGGTCTTCTTTCTGAGGTGTTTGCGGTATTGGCTGAGTTTCAATGCGATGTGGTCGAGGCTAAAGTTTGGACACACAATGGCCGGACTGCTTCTTTAATTTATGTTAAAGACTGCGCCTCTGGGACTTCTATTGAAGATTCTCAGAAAATTAATCGGCTCGAAGCACGTTTGAGATATGTTTTACAAGGAGATGGTGATATTAGGAGTGCAAAAACATCTATTTCCGATGTTGTTATACACCCTGAAAGAAGGCTCCACCAAATGATGTTTGCCGACCGTGATTATCAGAAGAGTCCAATTTTCAAGTTCACTTCAGCGACACCGTTAGTGACTGTCCAAAATTGGGCAGAAAGGAGTTATTCGGTTGTTAATGTCCAGTGTAAGGATCGCGCCAAGTTATTGTTTGATGTAGTGTGCAATTTGACAGACATGGAATATGTTGTGTTCCATGCAACTATCAACACAAGGATTGACCAAGCTTACATGGAGTTTTATATAAGACATAAGGATGGCACCCCGATTAGTTCAGAACCGGAGCGTCAACGAGTGATTCAATGCTTGCAAGCGGCTGTAGAGAGAAGATCATGCGAGGGTGTTAGACTAGAGTTATCCGTGGAAGACAGACAAGGGCTTCTAGCTGAGGTGATGAGAACGTTCCGAGAGAACGGGTTGAATGTGACTAGGGCAGACATAACCACGAGCGGTGACTTGGCCGCTAATGTTTTCTATGCAACAGATGCCATTGGATACCCGGCAGACCAAAAAATCATCGAGTCAGTTAGAGAGAAAATTGGGTTAAGCAATTTAAAAGTGAAGGAGTTGCCTATTGTAAGTAATGAGAAGGCAGAGAGGGAAGATCAATCAGTTGGAGTTGGTGGGGCAGTGTTATTGTCCCTTGGGAGCATTGTGAGAAGGAATCTATACAATTTGGGTTTAATCAAATCTTGTTCTTAA 1326 0.4201 MEWSACTDEYEKLVFRMSTPRVVIDNAVCSNSTIVKFDSARKHGILLEAVQILSDLNLFIKKAYVSSDGRWFMDVFHVTDQDGNKLTDESVLKYIEQSLGSIYNGKTNHRNGLTALELKGTDRVGLLSEVFAVLAEFQCDVVEAKVWTHNGRTASLIYVKDCASGTSIEDSQKINRLEARLRYVLQGDGDIRSAKTSISDVVIHPERRLHQMMFADRDYQKSPIFKFTSATPLVTVQNWAERSYSVVNVQCKDRAKLLFDVVCNLTDMEYVVFHATINTRIDQAYMEFYIRHKDGTPISSEPERQRVIQCLQAAVERRSCEGVRLELSVEDRQGLLAEVMRTFRENGLNVTRADITTSGDLAANVFYATDAIGYPADQKIIESVREKIGLSNLKVKELPIVSNEKAEREDQSVGVGGAVLLSLGSIVRRNLYNLGLIKSCS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03003 441 CDD ACT_ACR_1 33 101 - -
Vifa4g03003 441 CDD ACT_ACR_3 244 318 - -
Vifa4g03003 441 Gene3D - 113 186 - -
Vifa4g03003 441 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
Vifa4g03003 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Vifa4g03003 441 SUPERFAMILY ACT-like 321 393 IPR045865 -
Vifa4g03003 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 397 IPR040217 -
Vifa4g03003 441 SUPERFAMILY ACT-like 111 185 IPR045865 -
Vifa4g03003 441 SUPERFAMILY ACT-like 29 97 IPR045865 -
Vifa4g03003 441 Pfam ACT domain 324 384 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03003 Vifa-Chr4 963098507 963100641 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03003 - - gmx:100794729 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00776 1 129500073 129502187 Vifa4g03003 4 963098507 963100641 ECH
Vifa4g03003 4 963098507 963100641 Vifa4g03003 4 963098507 963100641 ECH