Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02512 ATGGGGCTTGAAGGTTTGATTCCAAGGCATAATCGTTCAAAGAGCTTTCCTGATAAGAAAACAGTCAAGGAGTATATTTCAGATAGCTTTGAGACTTCAGATCAAACAAAGCTGGATGCAGGTTACGTCACGGAATGCAGTGAAACTAATAAAAAACAAACCCCTGTGAATAATGTTCAAAATACTCTAAAGCAAGAGATTTTACAATTAGAGAAAAGATTAGAAGACCAGTTTAAGGTTAGATGCACATTAGAAAAGGCACTTGGATATAGACCTATATCTCTTGTTAATCCAGATGACATGACAATACCAAAGCCAACCACAGATTTAATTAAAGAAATCGCAGTTTTAGAGTTAGAAGTTGTATATTTGGAACAATATCTTCTCTCCTTATACCGGAAAGCATTTGAACAACAACTATCCCCAGCAGTGGCTCCATCTACCGTGGAGGGAAGTGAAAAGTCTCCTCCTCTGACAACACCTCGAGATAGATTCCTTGAAGTTTCTCCTTCTTTAACAATAAAAGGATGTTCTGATGTACAATGTATTGATCACAAGGTTGATACTATTCAAAAAGAATGTAATGAATATGGACTCGAGACTCCAGATAACGAATGCATTGTACGTTATCCAGAAGAAAAACATTTAGACTCTGGTGTTCATCGTTGTCACTCCTCGTTATCTCAATATTCAGCAAGAGTATCCCCTCCAGAAGAAGCGTTGACCGATTCTTTACGCGCCTGTTATTCTCAACCCTTGTCCATGGTGGAGTTTGCCGAAAGCATTGATGCTTCAACAAAAATAATCAGTCTAGCAGAACATCTCGGTACTAGAATATTTGATCATATTCCAGAAACAGCTAATAGGCTCTCTGAGGATATGGTTAAATGTATATCAGCTATATATTACAAACTTTCAGACGCTCCTGCAACAAATCCCGGCCTTTCATCTCCCAGTACTTCAACAAGTGCCTTTTCTATTGGAGATCAAGGAGACATCTGGAGTCCAGGATTCAAAAATAACTCGTCTTTCGATGTAGAGTTGGACAATCCTTTTCATGTTGAAGGACTCAAGGAATTTAGTGGGCCTTATAGCACCATGGTTGAGGTATCATGGATTTATAAAGTGAATCAGAAGTTAGGCAATACAGAGCAATTGCTCCAGAATTTCAGGTCACTTATTGGTCAATTAGAAGAAGTAGATCCGGGGAAGTTGAAACCCGATGAGAAGTTAGCTTTCTGGATCAACGTACACAATGCTTTAGTGATGCATGCTTTCTTGGCTTATGGAATCCCACAAAACAATGTCAAAAGGGTCCTTCTTCTATTGAAGGCTGCATATAATGTTGGAGGTCATACAGTAAGTGCCGACACAATACAGAATACAATACTCGGTTTCCGAATGTCTCGTCCTGGACAGTGGTTCCGCGTGTTTTTTTCTTCGAGAACAAAATTCAAAGCTGGAGATGGACGACAAGCATATGCAATCGAGCAGCCTGAGCCTCTTCTTCACTTTGCACTTTGTTCAGGAAACCACTCTGATCCAGCGGTACGTGTATATACACCGAAGAGAGTGCATCGAGAACTAGAAGTTGCAAAGGAAGAGTACATTAGAGCCACGTTTGGCGTACGGAAGGACCAGAAAATACTTGTACCCAAGATTGTAGATTCATTCTCCAAGGAATCGGGTTTGTCCCACGCCAGTCTTATAGAGATGATCCAACAGTCTCTACCTGAACCTCTGAGAAAGAGTATTAAGAAATGTCACTTTGCGAAATCCGGGAAGAGCATAGAATGGATTCCACACAACTTTACTTTTCGATATCTCATACCTAAGGAGCTGATAAAATAA 1851 0.4003 MGLEGLIPRHNRSKSFPDKKTVKEYISDSFETSDQTKLDAGYVTECSETNKKQTPVNNVQNTLKQEILQLEKRLEDQFKVRCTLEKALGYRPISLVNPDDMTIPKPTTDLIKEIAVLELEVVYLEQYLLSLYRKAFEQQLSPAVAPSTVEGSEKSPPLTTPRDRFLEVSPSLTIKGCSDVQCIDHKVDTIQKECNEYGLETPDNECIVRYPEEKHLDSGVHRCHSSLSQYSARVSPPEEALTDSLRACYSQPLSMVEFAESIDASTKIISLAEHLGTRIFDHIPETANRLSEDMVKCISAIYYKLSDAPATNPGLSSPSTSTSAFSIGDQGDIWSPGFKNNSSFDVELDNPFHVEGLKEFSGPYSTMVEVSWIYKVNQKLGNTEQLLQNFRSLIGQLEEVDPGKLKPDEKLAFWINVHNALVMHAFLAYGIPQNNVKRVLLLLKAAYNVGGHTVSADTIQNTILGFRMSRPGQWFRVFFSSRTKFKAGDGRQAYAIEQPEPLLHFALCSGNHSDPAVRVYTPKRVHRELEVAKEEYIRATFGVRKDQKILVPKIVDSFSKESGLSHASLIEMIQQSLPEPLRKSIKKCHFAKSGKSIEWIPHNFTFRYLIPKELIK 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02512 616 Pfam Leucine-zipper of ternary complex factor MIP1 57 138 IPR025757 -
Vifa4g02512 616 MobiDBLite consensus disorder prediction 143 162 - -
Vifa4g02512 616 PANTHER UNCHARACTERIZED 40 614 - -
Vifa4g02512 616 Pfam Protein of unknown function, DUF547 404 537 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02512 Vifa-Chr4 761459193 761462673 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02512 - - gmx:100816025 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02512 4 761459193 761462673 Vifa4g02512 4 761459193 761462673 ECH
Vifa1g07010 1 1083371410 1083380146 Vifa4g02512 4 761459193 761462673 PCT