Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02454 ATGGTGAATCTAGTGGAAGCTCAAAAACCATTGATGCATGCTCTAATGAAAATGGCAGGGATAAGACCCTACACAGTTGAAATAGAATCAGGAACCAAAATGAGTTTCTGGGTACCTTCAGAAACCATAACAAAACCAAAGAAAAAAGAAGAAAAACCCAAACTCATCGCGAAACCCACCAAGCCCGTGGTTGTTCTAGTCCACGGTTTCGCCGCAGAAGGAATAGTCACATGGCAGTTTCAAGTGGGCGCGTTAACAAAAAAATACGCTGTTTATGTTCCAGATCTTCTATTCTTCGGAGGTTCTGTCACCGACAAAACAGACAGATCACCGAGGTTTCAAGCGGAGTGTTTGGCGACAGCGTTAAGGAAACTCGGCGTTGAGAAATGTACTGTTGTTGGTTTTAGCTACGGCGGAATGGTGGCGTTTAAGATGGCAGAGATGTTTCCTGAATTGGTGGAAGCTATGGTTATATCAGGGTCTATTTTGGCCATGACTGATTCCATTAGTGTTAGTAGTTTGCAACAACTTGGATTTTCTTCTTCTTCTGAACTTTTGTTGCCAAACTCTGTTAAGGGTCTTAAAACGCTTTTATCTATTGCTGCTTATAAAAAGCTTTGGTTTCCAGATCGGTTGCACAGAGATTTTCTTCAGGTGATGTTCACTAATAGGAAGGAGCGAGGTGAACTACTAGAAGGGTTAGTAATTAGCAATAAAGAAATTGACATTCCAAATTTCTCACAGAGGATACATCTTCTATGGGGTGAAAATGATCAAATTTTCAAATTGGAATTTGCTCAAAATATGAAAGAGCAACTAGGAGATAGCACAACATTTGAAGGCATAAAGAAAGCTGGTCATCTTGTTCATTTGGAGAGACCATGTGTCTACAACAGATGCCTCAAGCACTTTATTGCTTCCTTCTTGGCGTCAAATAAAACCAAATAA 948 0.403 MVNLVEAQKPLMHALMKMAGIRPYTVEIESGTKMSFWVPSETITKPKKKEEKPKLIAKPTKPVVVLVHGFAAEGIVTWQFQVGALTKKYAVYVPDLLFFGGSVTDKTDRSPRFQAECLATALRKLGVEKCTVVGFSYGGMVAFKMAEMFPELVEAMVISGSILAMTDSISVSSLQQLGFSSSSELLLPNSVKGLKTLLSIAAYKKLWFPDRLHRDFLQVMFTNRKERGELLEGLVISNKEIDIPNFSQRIHLLWGENDQIFKLEFAQNMKEQLGDSTTFEGIKKAGHLVHLERPCVYNRCLKHFIASFLASNKTK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02454 315 PANTHER SI:DKEY-122A22.2 1 306 - -
Vifa4g02454 315 SUPERFAMILY alpha/beta-Hydrolases 60 306 IPR029058 -
Vifa4g02454 315 PRINTS Epoxide hydrolase signature 282 304 IPR000639 GO:0003824
Vifa4g02454 315 PRINTS Epoxide hydrolase signature 88 103 IPR000639 GO:0003824
Vifa4g02454 315 PRINTS Epoxide hydrolase signature 132 145 IPR000639 GO:0003824
Vifa4g02454 315 PRINTS Epoxide hydrolase signature 146 159 IPR000639 GO:0003824
Vifa4g02454 315 Gene3D alpha/beta hydrolase 7 308 IPR029058 -
Vifa4g02454 315 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
Vifa4g02454 315 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Vifa4g02454 315 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Vifa4g02454 315 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Vifa4g02454 315 Pfam alpha/beta hydrolase fold 62 175 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02454 Vifa-Chr4 739293519 739297840 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02454 - - gmx:100816070 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02454 4 739293519 739297840 Vifa1g06817 1 1051223158 1051225041 ECH
Vifa4g02454 4 739293519 739297840 Vifa4g02454 4 739293519 739297840 ECH
Vifa1g06817 1 1051223158 1051225041 Vifa4g02454 4 739293519 739297840 PCT