Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06817 ATGGTGAACACGGTGAGAGTTGCTTGGTCATTGATTAGTTGGACAATGAAAAAGGCTGGTGTTGTGGAGCCTTGCACAGTGGAGATAGAGGCTGGTACAGTTATGAGATTTTGGGTTCCATTTCAAACCATTTCAAAACCAACCAAGCCAGTAGTTGTTCTACTCCACGCCTTCTGCGCCGACGGACTTGCAAACTGGGTGTTCCAAATCATCAGTTTAGCCAAAAACTATGATGTTTACGTGCCCGATCTAATTTTCTTCGGCGGCTCCACAACGAATAAGCCGGATAGGTCGCCGGCTTTTCAAGCGGAGTGTTTGGCGAAGGGGCTAAAGAAACTTGGAGTGGAGAAATGTGCTGTAGTTGGAGTCAGTTATGGTGGAATAGTGGCGTTAAAAATGGCTGAATTGTATAGCGAGGTGGTTCAAGCAGTGGTTATATCAAGCTCGGTTTTGGCTATACAAGAGTCTATGGTTAGTAGAGCAGTGGAAGATATTGGATTCTCTTCTTGTTCAGAAATGTTATTACCATCTTCTACTGAGGGGTTGAGAACACTTCTTACGGTTGCTGTATACAGAAACATTCAGTTTCCCAACTGTATGCTCACTGACTTTCTCAAGGTGATGTTCTCTAATAGGAAGGAGCGAAATCAGCTATTAGAGGCTTTAGTCATTAGCTACAAAGACATCCACATCCCTAAATTTTCACAGCGGATACATCTTTTATGGGGCGAGAAAGATAAAATTTTTAACCCTGAAATCGCACACAAAATAAAAGAGAGGCTTGGAAATAACACAACAGTTGAAGTAATAAAGAAAGCAGGCCACTTGGTTAATCTGGAGCGACCATGTGTTTATAATAAGTGTCTAAACAAGTTTCTTTCTTCTGTTATGATTGATGAAAAAAAATAA 909 0.4136 MVNTVRVAWSLISWTMKKAGVVEPCTVEIEAGTVMRFWVPFQTISKPTKPVVVLLHAFCADGLANWVFQIISLAKNYDVYVPDLIFFGGSTTNKPDRSPAFQAECLAKGLKKLGVEKCAVVGVSYGGIVALKMAELYSEVVQAVVISSSVLAIQESMVSRAVEDIGFSSCSEMLLPSSTEGLRTLLTVAVYRNIQFPNCMLTDFLKVMFSNRKERNQLLEALVISYKDIHIPKFSQRIHLLWGEKDKIFNPEIAHKIKERLGNNTTVEVIKKAGHLVNLERPCVYNKCLNKFLSSVMIDEKK 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06817 302 Pfam alpha/beta hydrolase fold 50 149 IPR000073 -
Vifa1g06817 302 Gene3D alpha/beta hydrolase 21 298 IPR029058 -
Vifa1g06817 302 SUPERFAMILY alpha/beta-Hydrolases 47 295 IPR029058 -
Vifa1g06817 302 PRINTS Alpha/beta hydrolase fold signature 238 252 IPR000073 -
Vifa1g06817 302 PRINTS Alpha/beta hydrolase fold signature 76 91 IPR000073 -
Vifa1g06817 302 PRINTS Alpha/beta hydrolase fold signature 120 133 IPR000073 -
Vifa1g06817 302 PANTHER SI:DKEY-122A22.2 1 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06817 Vifa-Chr1 1051223158 1051225041 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06817 - - mtr:11409564 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02454 4 739293519 739297840 Vifa1g06817 1 1051223158 1051225041 ECH
Vifa1g06817 1 1051223158 1051225041 Vifa1g06817 1 1051223158 1051225041 ECH
Vifa1g06817 1 1051223158 1051225041 Vifa4g02454 4 739293519 739297840 PCT