Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02156 ATGGGAATTTTCGCAACCAAGTTCTTTACCAGAGCCCGCAACTTCATAGGCATAGGACTCGCCGCTACCGCCACCCTCGCCGCCACATCTTCCTCCTCCGCCGCTACCTCCACCTCTTCTTCCGATGACACTGACTCTTCCTACTATTCTTCTTCCGACCAAACAAATGGCTGCAGGTTACTGAAAACAAAGCTATGCATAATCGGAAGCGGCCCAGCGGCTCACACAGCCGCCATTTACGCCGCTCGAGCCGAGCTCAAGCCGATCCTATTCGAAGGCTGGATGGCCAACGATACTGCTCCGGGTGGTCAGCTCACTACCACAACCGACGTCGAGAATTTCCCGGGATTTCCGGATGGCATCCTCGGTGCCGAACTCATGGACAGCTGCCGTAAACAATCGCTGCGGTTAGGCACTGAAATCATCACCGAAACAGTTACAAAGGTAGATTTCTCTAAAAGGCCGTTTAAAGTTGTAACTGATTCGACCACCGTGGAGGCCGAATCCGTCGTGATCGCCACTGGAGCCGTCGCGAAAAAGTTAGTTTTCAACGGCTCCGGCGACGGTCCTGATGGATACTGGAACCGCGGAATATCGGCATGTGCCGTTTGTGACGGTGCAGCTCCGATATTCCGAAATAAACCCTTAGTGGTTGTCGGCGGCGGGGATACCGCTATGGAGGAAGCTACATTCCTCAGCAAATTCGGTTCGAAAGTGTATATAATTCATAGGAGGGATGAATTTAGGGCTAGTAAAATGATGCAAAGTAAGGTGATGAAGAATCCAAAGGTTGAGGTGTTGTGGAATTCAGTGGTTGTTGGAGCTTATGGAGATGAAAAGGGGAGGGTTCTTGGGGGAGTCAAGGTGAAGAATTTGGTGAATGGTGATGTGTTTGATTTGAAGGTTTCGGGTTTGTTCTTTGCGATTGGGCACGAACCCGCTACGAAGTTTTTGGATGGTCAAGTTGAATTGGATTGTGATGGTTACATTGCGACAAAGCCGGGTACTACGGTGACTAGTGTTGATGGAGTTTTTGCTGCTGGTGATGTTCAGGATAAGAAGTATAGACAAGCTATTACTGCAGCTGGAACTGGGTGTATGGCAGCATTGGATGCAGAACATTATTTGCAACGGGTTAGTTTGAAGGAGGGTAAGAGTGGTTGA 1164 0.4966 MGIFATKFFTRARNFIGIGLAATATLAATSSSSAATSTSSSDDTDSSYYSSSDQTNGCRLLKTKLCIIGSGPAAHTAAIYAARAELKPILFEGWMANDTAPGGQLTTTTDVENFPGFPDGILGAELMDSCRKQSLRLGTEIITETVTKVDFSKRPFKVVTDSTTVEAESVVIATGAVAKKLVFNGSGDGPDGYWNRGISACAVCDGAAPIFRNKPLVVVGGGDTAMEEATFLSKFGSKVYIIHRRDEFRASKMMQSKVMKNPKVEVLWNSVVVGAYGDEKGRVLGGVKVKNLVNGDVFDLKVSGLFFAIGHEPATKFLDGQVELDCDGYIATKPGTTVTSVDGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQRVSLKEGKSG 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02156 387 Gene3D - 67 375 IPR036188 -
Vifa4g02156 387 NCBIfam thioredoxin-disulfide reductase 64 376 IPR005982 GO:0004791|GO:0005737|GO:0019430
Vifa4g02156 387 PRINTS FAD-dependent pyridine nucleotide reductase signature 167 185 - -
Vifa4g02156 387 PRINTS FAD-dependent pyridine nucleotide reductase signature 302 318 - -
Vifa4g02156 387 PRINTS FAD-dependent pyridine nucleotide reductase signature 329 351 - -
Vifa4g02156 387 PRINTS FAD-dependent pyridine nucleotide reductase signature 65 84 - -
Vifa4g02156 387 PRINTS FAD-dependent pyridine nucleotide reductase signature 215 233 - -
Vifa4g02156 387 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 201 223 IPR008255 GO:0016491
Vifa4g02156 387 FunFam Thioredoxin reductase 188 314 - -
Vifa4g02156 387 SUPERFAMILY FAD/NAD(P)-binding domain 62 376 IPR036188 -
Vifa4g02156 387 Pfam Pyridine nucleotide-disulphide oxidoreductase 64 364 IPR023753 GO:0016491
Vifa4g02156 387 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 63 378 - -
Vifa4g02156 387 Gene3D - 183 314 IPR036188 -
Vifa4g02156 387 PRINTS Pyridine nucleotide disulphide reductase class-II signature 304 325 - -
Vifa4g02156 387 PRINTS Pyridine nucleotide disulphide reductase class-II signature 123 133 - -
Vifa4g02156 387 PRINTS Pyridine nucleotide disulphide reductase class-II signature 339 357 - -
Vifa4g02156 387 PRINTS Pyridine nucleotide disulphide reductase class-II signature 263 279 - -
Vifa4g02156 387 PRINTS Pyridine nucleotide disulphide reductase class-II signature 168 176 - -
Vifa4g02156 387 PRINTS Pyridine nucleotide disulphide reductase class-II signature 211 235 - -
Vifa4g02156 387 PRINTS Pyridine nucleotide disulphide reductase class-II signature 64 86 - -
Vifa4g02156 387 PRINTS Pyridine nucleotide disulphide reductase class-II signature 102 117 - -
Vifa4g02156 387 PRINTS Pyridine nucleotide disulphide reductase class-II signature 194 206 - -
Vifa4g02156 387 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02156 Vifa-Chr4 662909081 662911987 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02156 K00384 - gmx:100794363 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06272 1 979588111 979591232 Vifa4g02156 4 662909081 662911987 PCT