Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01426 ATGGAGAAAAACAATCAATCTCATAGACAACTTCTGATAATGAAACAATCTTTCTTTGATCAGGGATTGCTTGATGAACAATTTATCCAACTAGAAGAACTACAAGACGAAGCTAATCCTAACTTTGTCGAAGAAATTGTCACTCTTTACTACCGTGATTCACTACGCCTTATTTCAAGCATAGAACAAGCTTTAAAAGAGAGGAACATGTTGGATTTCAACAAACTGGACACCCTTATGCATCAGTTCACAGGAAGTAGTTCAAGCATTGGAGCCAAAAAGGTGAAAGCTGAGTGCAATCTGTTTAGGGAATATTGCAGTGCAGTAAATATTGAAGGATGCATGAAGAGTTTCCATCAATTAAAGAAAGAATATGCTTCACTAAAAAAGAAACTTGAAGCTTATTTTCAGTTGGCTAGGCAAGTTGGGCTCTCAGAGGCAGAGTGTCACTCCAAGTGA 459 0.3747 MEKNNQSHRQLLIMKQSFFDQGLLDEQFIQLEELQDEANPNFVEEIVTLYYRDSLRLISSIEQALKERNMLDFNKLDTLMHQFTGSSSSIGAKKVKAECNLFREYCSAVNIEGCMKSFHQLKKEYASLKKKLEAYFQLARQVGLSEAECHSK 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01426 152 Pfam Hpt domain 45 128 IPR008207 GO:0000160
Vifa4g01426 152 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 39 135 IPR008207 GO:0000160
Vifa4g01426 152 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 10 144 IPR045871 GO:0000160|GO:0009927|GO:0043424
Vifa4g01426 152 Coils Coil 118 138 - -
Vifa4g01426 152 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 7 142 IPR036641 GO:0000160
Vifa4g01426 152 Gene3D HPT domain 2 148 IPR036641 GO:0000160
Vifa4g01426 152 FunFam Histidine-containing phosphotransfer protein 4 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01426 Vifa-Chr4 423134812 423135833 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01426 K14490 - gmx:100798055 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01426 4 423134812 423135833 Vifa5g00236 5 33053424 33054201 ECH
Vifa4g01426 4 423134812 423135833 Vifa4g01426 4 423134812 423135833 ECH
Vifa5g00236 5 33053424 33054201 Vifa4g01426 4 423134812 423135833 PCT