Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01018 ATGAACAACGGTGGTGAACAACACACTGCTATTGAAACACAGTACATAAGAAGACATCACAAACATGATTTAAGAGACAATCAGTGTTCCTCTGCTCTTGTTAAACACATCAAAGCCCCTGTTCATCTTGTTTGGTCTCTGGTTAGAAGATTTGATCAGCCACAGAAATATAAACCATTTGTTAGCAGGTGTATTATGCAAGGTGATCTTGGCATTGGAAGTGTTAGAGAAGTGAATGTTAAATCTGGTCTTCCAGCTACAACTAGTACTGAGAGGTTGGAACAGCTTGATGATGAAGAACATATTCTCGGTATCAGGATTGTTGGTGGTGATCATAGGCTCAGGAACTATTCTTCCATAATCACTGTGCATCCGGAGGTTATTGATGGAAGACCAGGTACAATGGTGATTGAATCATTTGTCGTGGACGTGCCTGAAGGGAACACGAGAGATGAAACGTGTTACTTTGTAGAGGCGTTGATCAGGTGCAACTTGAGTTCTTTAGCTGATGTCTCGGAGAGGATGGCCGTGCAGGGTCGAACCGATCCTATCAATATCAATCAATAA 567 0.4198 MNNGGEQHTAIETQYIRRHHKHDLRDNQCSSALVKHIKAPVHLVWSLVRRFDQPQKYKPFVSRCIMQGDLGIGSVREVNVKSGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYSSIITVHPEVIDGRPGTMVIESFVVDVPEGNTRDETCYFVEALIRCNLSSLADVSERMAVQGRTDPININQ 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01018 188 Pfam Polyketide cyclase / dehydrase and lipid transport 33 173 IPR019587 -
Vifa4g01018 188 SUPERFAMILY Bet v1-like 29 170 - -
Vifa4g01018 188 CDD PYR_PYL_RCAR_like 29 173 - -
Vifa4g01018 188 Gene3D - 2 182 IPR023393 -
Vifa4g01018 188 PANTHER - 27 170 - -
Vifa4g01018 188 FunFam Abscisic acid receptor PYL9 2 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01018 Vifa-Chr4 293344127 293345426 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01018 K14496 - gmx:100500065 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01018 4 293344127 293345426 Vifa3g04113 3 1213356394 1213357471 ECH
Vifa4g01018 4 293344127 293345426 Vifa4g01018 4 293344127 293345426 ECH