Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04113 ATGAATGGAATTGGAAGTGGAAGGTTTAGTAATATGGAGATGGAATATATAAGAAGACATCACCGGCACCAGCCTGGAAACAATCAGTGTGGTTCTGCTCTTGTTAAGCATATAAGAGCACCGGTTCCTCAGGTATGGTCTTTGGTTAGAAGGTTTGATCAGCCCCAAAAGTATAAACCATTTGTAAGCAGATGTGTTGTAAGGGGAAACCTTGAGATTGGAAGTTTACGAGAAGTTGATGTTAAGTCGGGCCTTCCGGCTACCACAAGTACAGAAAGGTTGGAGCTTCTTGATGACAATGAGCATGTTCTAAGCATCAAGATTATCGGCGGTGATCATAGGCTTACGAACTACTCGTCGGTGGTGTCTCTCCACCCGGAAATTATTGATGGAAGGCCGGGTACGCTAGTAATTGAATCTTTTGTGGTGGATATACCTGACGGAAACACTAAGGATGAGACTTGCTACTTTGTTGAAGCTGTTATTAAGTGCAATCTTAAATCACTTGCGGATGTCTCAGAAGGGATTGCTTTGCAAGACCGCACTGAACAAATTGATCGGATTTAG 567 0.4303 MNGIGSGRFSNMEMEYIRRHHRHQPGNNQCGSALVKHIRAPVPQVWSLVRRFDQPQKYKPFVSRCVVRGNLEIGSLREVDVKSGLPATTSTERLELLDDNEHVLSIKIIGGDHRLTNYSSVVSLHPEIIDGRPGTLVIESFVVDIPDGNTKDETCYFVEAVIKCNLKSLADVSEGIALQDRTEQIDRI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04113 188 SUPERFAMILY Bet v1-like 35 171 - -
Vifa3g04113 188 Pfam Polyketide cyclase / dehydrase and lipid transport 36 174 IPR019587 -
Vifa3g04113 188 CDD PYR_PYL_RCAR_like 36 174 - -
Vifa3g04113 188 Gene3D - 5 183 IPR023393 -
Vifa3g04113 188 FunFam Abscisic acid receptor PYL9 4 183 - -
Vifa3g04113 188 PANTHER - 29 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04113 Vifa-Chr3 1213356394 1213357471 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04113 K14496 - gmx:100813825 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01018 4 293344127 293345426 Vifa3g04113 3 1213356394 1213357471 ECH
Vifa3g04113 3 1213356394 1213357471 Vifa3g04113 3 1213356394 1213357471 ECH