Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00111 ATGCACTTCATTCAGATTCTTTTCTTGTTAACTCTCTCTCCTTTAATTTGTGTTAGTTGTGAGCATTTCGTTCTTGTTCATGGAGCATACCATGGTGCATGGTGTTGGTATAAGGTTGCAACTATGCTTAAATCAGCTGGTCATAATGTTACAACTGTTGAATTGGCTGCTTCTGGTATCAATCCAATACAGGTTCAAGAGATTCGTCAAATTTCACAGTATTATGAACCTTTGATGACATTTATGGAATCTCTTCCTCCAAATGAGAAGGTGATTCTAGTAGGTCATAGTATTGGTGGAGTGTCTACATCTGTAGCTATGGAAAAATTTCCAGACAAAATTTCAGTTGCAGTTTTTGTTACTGCTTATGTGCTTAGTCAAAATCTCACATACCCTACTATTCAACAAGAGGAAGCTAGAAGGATCACTAATTTAATGGACTCAAAGTTTTTCTTTTTTGATGGACCCAACAAACCCGCAACTGCTAGATTGCTTGGACCGAAATACCTGGCATCCAGTCTGTATCAATTATCACCACCTGAGGACTTGACCCTTGCATTGTCCCTGGTGAGACCTGATCCACTTTATAATGATGTTGAATTATTGAAGAAGGAAACAGCAGTTACCAATGATAGAAATGGAAGGGTACCTAAAATTTTTGTCATAAGTAAAAGTGATAATTTGATAACAGAGGATTTTCAAAAGTGGATAATTGAGAGAAGTGGTCCTTTTGCTGAGGTGAAAGTGATTAATGATTCTGATCACATGGTCATGTTCTCTAAACCACAGAACCTTACTTCTATCCTTATAAAGATTGCACATAAATATGGTATTCGTGCCTACCATGTCCCAAACAATTATGTGTATAGGTTCGGGTATATTTCTAATTATCAATTATGA 900 0.3667 MHFIQILFLLTLSPLICVSCEHFVLVHGAYHGAWCWYKVATMLKSAGHNVTTVELAASGINPIQVQEIRQISQYYEPLMTFMESLPPNEKVILVGHSIGGVSTSVAMEKFPDKISVAVFVTAYVLSQNLTYPTIQQEEARRITNLMDSKFFFFDGPNKPATARLLGPKYLASSLYQLSPPEDLTLALSLVRPDPLYNDVELLKKETAVTNDRNGRVPKIFVISKSDNLITEDFQKWIIERSGPFAEVKVINDSDHMVMFSKPQNLTSILIKIAHKYGIRAYHVPNNYVYRFGYISNYQL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00111 299 SUPERFAMILY alpha/beta-Hydrolases 22 273 IPR029058 -
Vifa4g00111 299 Gene3D alpha/beta hydrolase 19 277 IPR029058 -
Vifa4g00111 299 FunFam (S)-hydroxynitrile lyase 18 277 - -
Vifa4g00111 299 Pfam Alpha/beta hydrolase family 23 264 IPR000073 -
Vifa4g00111 299 PANTHER METHYLESTERASE FAMILY MEMBER 21 274 IPR045889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00111 Vifa-Chr4 13493819 13494874 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00111 22 183 Miscellaneous Gene Families AT5G10300 43.210 1.29e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00111 - - psat:127076684 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00111 4 13493819 13494874 Vifa4g00111 4 13493819 13494874 ECH
Vifa4g00111 4 13493819 13494874 Vifa1g07049 1 1089438130 1089439123 PCT