Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07049 ATGTCTGAATTCAATATGAACCAAAAACAACAGAAGCATTTTGTTCTTGTTCATGGCGTTTGCGTTGGAGCTTGGACTTGGTACAAACTAAAACCACAATTAGAGTCTCTTGGTCACAAGGTCACAACACTTGATCTTGCAGCTTGTGGCACCAACACACACAAAATTGAAGATGTTCATACTTTTGCTGAGTATGCTAAGCCTTTGTTAGAGTTTTTAGCATCACTTGATCCAAATGAAAAAGTGATTCTTGTTGGACATAGTTTTGGAGGGATGAGTGCAGCGCTTGCAATGGAAAAATTCTCAGAAAAAATAGCAGTTGGAATTTTCATAGCAGCTTTTATTCCTGATGCTCTACATCAACCATCATATGTAATACAACAGTATCTTGAGAGACATCCAATGAGTGGATGGTTAGATACTGAATTTTCATTTGATGGAAGAAAAATGGTTGTGCTTCCTGGCTTCAAGTTCTTGTCCACTAAATTCTTTCAACTATGCTCAAAAGAGGATTTTGAATTGGTGAAGATATTATTAAGAGAAGGGTCATTTTTTCTTGAGGATCTGTCTGAGGCAGAGAATCTGTCCAAAGAGAGATATGAATCGGTTCCACGTGCTTATGTTGTTGCCAATGATGACTTGGCAGTTCCAGTGGAGTTTCAACAATGGATGATACAAAATGCTGGGATTGATGTTGTGAAAGTGGTCGATGGAGCTGATCATATGGCCATCCTTTCCAAACCTCAGGAACTGTGTTTGTCTCTCCTTGAGATTGCTGATAAATACATTTAG 792 0.3851 MSEFNMNQKQQKHFVLVHGVCVGAWTWYKLKPQLESLGHKVTTLDLAACGTNTHKIEDVHTFAEYAKPLLEFLASLDPNEKVILVGHSFGGMSAALAMEKFSEKIAVGIFIAAFIPDALHQPSYVIQQYLERHPMSGWLDTEFSFDGRKMVVLPGFKFLSTKFFQLCSKEDFELVKILLREGSFFLEDLSEAENLSKERYESVPRAYVVANDDLAVPVEFQQWMIQNAGIDVVKVVDGADHMAILSKPQELCLSLLEIADKYI 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07049 263 PANTHER METHYLESTERASE FAMILY MEMBER 9 260 IPR045889 -
Vifa1g07049 263 SUPERFAMILY alpha/beta-Hydrolases 10 259 IPR029058 -
Vifa1g07049 263 Pfam Alpha/beta hydrolase family 14 251 IPR000073 -
Vifa1g07049 263 Gene3D alpha/beta hydrolase 5 263 IPR029058 -
Vifa1g07049 263 FunFam (S)-hydroxynitrile lyase 9 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07049 Vifa-Chr1 1089438130 1089439123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07049 9 170 Miscellaneous Gene Families AT5G10300 48.503 5.94e-45 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07049 - - tpra:123904154 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00111 4 13493819 13494874 Vifa1g07049 1 1089438130 1089439123 PCT