Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04617 ATGACAAGTTTCCATTTGGAAGGAACCGAGTCTCCAACAACAACAAAAAAACAAATCAAACAATTCTTAGCCGACACAAGCAACAACGTTTTCTGCTTTTTCCCCACTAATAACCTTTTCACGTTTGTCCCACTTCTCCTATCTCCAACAATTATTATACTTTACATAACCCTTTCCCTTCACCATTTGCCAATTCCTCGAAAAAATCTCATACTCCTATCAAACCTCATTCCAAAGAACAAAAACCAAGTGAGAAACAAAATGGCCACTGCAGAGAATGCATACACTCTTGATTCAGTGAGGAAGGCTTTGAATACCGAAACTGTTCAAGCTAAGGCCGGAAGATACGAAAACCCCGAAGAGAATCCCTTCTTTCCAGAAAATTTACAACCATTGCTTGTGCCATCTTACCCTTTCACAAAGATTTTGCACTCTGGAGCCGCTTCGGTTAATATAAACAAGTCCTTGTGGAAAATGTACTTTGATGACTTGCTTCCGTTGTTTGTTGCTTCGGGCGATGATGGCAACTACGCACAAACTGCAGCTAGTGATCTCTCATTGTTGCAGGCCATTTCTAAAAGGGTTCATTATGGAAAGTTTGTAGCTGAAGTTAAATTCCGGGAATCTCCTCAAGACTACGAGCCTTTAATTCGTGCTAAGGACAGAGAAGGGTTGATGAAATTGTTGACATTTAAGAGCGTTGAAGAGATGGTGAAGAAGAGGGTTGAAAAAAAGGCAACATTGTTTGGTCAAGAAATAAGCCTTGACAGCAATGATGACAGCAAAGAGAAAAAAAAGTTTGATCCATCAGTGGCTTCTAAATTGTATGAGAAATGGGTAATACCTCTTACTAAGGAAGTTCAGGTGGATTATCTATTGCGCCGGTTGGATTGA 894 0.4004 MTSFHLEGTESPTTTKKQIKQFLADTSNNVFCFFPTNNLFTFVPLLLSPTIIILYITLSLHHLPIPRKNLILLSNLIPKNKNQVRNKMATAENAYTLDSVRKALNTETVQAKAGRYENPEENPFFPENLQPLLVPSYPFTKILHSGAASVNINKSLWKMYFDDLLPLFVASGDDGNYAQTAASDLSLLQAISKRVHYGKFVAEVKFRESPQDYEPLIRAKDREGLMKLLTFKSVEEMVKKRVEKKATLFGQEISLDSNDDSKEKKKFDPSVASKLYEKWVIPLTKEVQVDYLLRRLD 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04617 297 SUPERFAMILY Chorismate mutase II 102 297 IPR036263 GO:0046417
Vifa3g04617 297 PANTHER CHORISMATE MUTASE 105 297 IPR008238 GO:0004106|GO:0009073
Vifa3g04617 297 ProSiteProfiles Chorismate mutase domain profile. 49 297 IPR008238 GO:0004106|GO:0009073
Vifa3g04617 297 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 78 297 IPR037039 GO:0004106|GO:0009073
Vifa3g04617 297 NCBIfam chorismate mutase 105 297 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04617 Vifa-Chr3 1321883210 1321885164 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04617 K01850 - gmx:100791341 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04617 3 1321883210 1321885164 Vifa3g04617 3 1321883210 1321885164 ECH
Vifa3g04617 3 1321883210 1321885164 Vifa2g03919 2 1143450955 1143452460 PCT