Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04576 ATGCTGTGTCATTTGGTTCCGTTGCCGCGGAAGAAAAAACCCGGTTCGGTTCCGGTTTACCTCAACGTTTACGATCTAACCCCAATGAATGGTTATGCTTATTGGTTCGGTCTTGGAGTTTATCATTCTGGGGTTCAAGTTCATGGGGTTGAATATGGATTTGGAGCACATGAACGTGAGACTACTGGAATTTTTGAAGTGGAGCCTGGGCACTGTCCAGGATTCACGTTTAGGAAAGCAGTTTATATTGGATCGACGGATCTGGGACCGAACGAGGTTCGGGGATTTATGGAAAAGCTGTCTCAAGAGTATGCTGGGAATAGCTACCATCTTATACAGAAGAATTGCAACCATTTCTGTAGTGATGTTTGTGTGAAATTAACTGGGAAGTCGATTCCGCGGTGGGTTAATAGACTTGCTCGACTTGGTTTTCTATGCAACTGCGTGCTTCCAACCAGCCTAAATGAAACAAAGGTTGGACAAGTTTCATTAGACAAGATTCAGGAAGGAGAAAATAAGAAAATGAGAAGTCAGTCCCGCCGGCAGGAGGCGTCTTCCAATCCTTCACTACCGCCAAACCAAAGACATTGCGGTATCCCATCATCGTCTGTTATTAATGCTTCATCCTCAACCGTAGCAGTAAAATAA 648 0.4444 MLCHLVPLPRKKKPGSVPVYLNVYDLTPMNGYAYWFGLGVYHSGVQVHGVEYGFGAHERETTGIFEVEPGHCPGFTFRKAVYIGSTDLGPNEVRGFMEKLSQEYAGNSYHLIQKNCNHFCSDVCVKLTGKSIPRWVNRLARLGFLCNCVLPTSLNETKVGQVSLDKIQEGENKKMRSQSRRQEASSNPSLPPNQRHCGIPSSSVINASSSTVAVK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04576 215 PANTHER DESUMOYLATING ISOPEPTIDASE 16 189 IPR008580 GO:0008233
Vifa3g04576 215 MobiDBLite consensus disorder prediction 181 215 - -
Vifa3g04576 215 Gene3D PPPDE domains 12 178 IPR042266 -
Vifa3g04576 215 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Vifa3g04576 215 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Vifa3g04576 215 MobiDBLite consensus disorder prediction 170 215 - -
Vifa3g04576 215 SMART DUF862_2a 17 155 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04576 Vifa-Chr3 1311845784 1311847817 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04576 K22763 - gmx:100786432 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04576 3 1311845784 1311847817 Vifa2g03941 2 1154718055 1154719407 PCT