Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03941 ATGACCTCACACCTATTAACGGTTATGCTTATTGGTTTGGTCTTGGAATCTACCATTCAGGTGTTCAAGTTCATGATGTTGAATATGGTTTTGGGGCACATGAAAATGACACAAGTGGTATATTTGAAGTGCAACCGAAAAACTGTCCTGGTTTCACTTTCAGAAAATCTATTTTCATTGGAACAACGGATCTGGGGGAGTAAAGATGTTGGTGTTTTCATGGAGAAACTAGCGAGAGAATATTCTGGAAATTCTTACCATCTTATTTCTAAGAATTGTAACCATTTTTGTGAGGATGTTTGTTATAAGTTGACGGGGAAATCGATTCCGAGATGGGTTAATCGACTTGCCAGACTTGGTTTATTTTGCAACTGTGTTCTTCCGCCTGGCTTAAACGAAACAAAGGTTCGACAAGTTACATCCGACAGGGTTCAAGAAGGTGAAAAACGGAAAATCAGAAGTCAATCCAGCAGATACGAGGCTTCCTCCAACCCCCGCGGTTCATCTAGACATTGCCTTCGTCCGTCGTCATTGATGAAAGCTTCTTCAACCACAACATTAACAGTGAAGTAA 573 0.4066 MTSHLLTVMLIGLVLESTIQVFKFMMLNMVLGHMKMTQVVYLKCNRKTVLVSLSENLFSLEQRIWGSKDVGVFMEKLAREYSGNSYHLISKNCNHFCEDVCYKLTGKSIPRWVNRLARLGLFCNCVLPPGLNETKVRQVTSDRVQEGEKRKIRSQSSRYEASSNPRGSSRHCLRPSSLMKASSTTTLTVK 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03941 190 SMART DUF862_2a 17 132 IPR008580 GO:0008233
Vifa2g03941 190 MobiDBLite consensus disorder prediction 138 190 - -
Vifa2g03941 190 Gene3D PPPDE domains 54 151 IPR042266 -
Vifa2g03941 190 MobiDBLite consensus disorder prediction 139 156 - -
Vifa2g03941 190 MobiDBLite consensus disorder prediction 157 190 - -
Vifa2g03941 190 Pfam PPPDE putative peptidase domain 59 128 IPR008580 GO:0008233
Vifa2g03941 190 ProSiteProfiles PPPDE domain profile. 1 131 IPR008580 GO:0008233
Vifa2g03941 190 PANTHER DESUMOYLATING ISOPEPTIDASE 68 166 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03941 Vifa-Chr2 1154718055 1154719407 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03941 K22763 - gmx:100820198 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04576 3 1311845784 1311847817 Vifa2g03941 2 1154718055 1154719407 PCT