Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04558 ATGTCTCTCAAACCGTCTATTTCCTCCGACCATACCATGCTTCCTTTGTCGGATCCTCCCAAAAATCAACCCGATGACAAGCTTTTCAAAGGCTCCGCCATGACCAAACGTGGTGCCTACGCTGCCATCTCTTACATGTCCTGCGCTGTTCTATTGGTGATGTTCAATAAGGCAGCTCTTTCATCTTATAACTTTCCATGTGCAAATGTTATCACACTTCTTCAGATGGTTAGTTCGTTGTTTTTTCTTTACATATTGAGGCGCTGGAGAGTAATTAGTTTTACAGCTAGTGAATCCTTACATATATCAGATACTTCAACAAAATTTGTATCACTCAAAACTTTGAAGCACACTTCTCCTTTGGCCGCAGCGTATTTACTTTACATGCTAGTTACCATGGAGGCTGTCCGGGGAGTAAATGTTCCAATGTATACAACATTGAGGAGGACAACAGTGGTATTTACAATGCTTGCAGAGTTTGTTTTTGTGGGGCAGAGGTATACACAATCTGTCGTTTTCAGTGTTGGCTTGATTATCTTTGGTGCGTTTGTCGCGGGAGCACGTGACTTATCTTTTGATGGTTATGGTTATGCCGTTGTTTTCATGGCAAACATCACTACAGCAATATATCTTGCTACCATAGCCCGCATCGGAAAAACTAGCGGTCTTAATAGCTTTGGCCTTATGTGGTGCAATAGTATCCTTTGTGGGCCAGTTTTACTCGTCTGGACATTTATTCGTGGTGACTTGAAGACGACAATCGATTTTCCTTATCTCTTCTCACCTGGTTTTCTCGTTATTTTGCTTTTTTCATGTATACTAGCATTCTTCTTGAACTACTGTATATTTCTCAACACAACTCTTAATTCTGCTCTGACACAGACTATTTGCGGTAATATGAAGGATCTATTTACAATCGGCTTTGGCTGGATAATTTTCGGTGGGCTACCATTTGATTTCTGGAATGTAGTTGGACAATTTCTCGGTTTCACCGGATCGGGTTTATATGCTTACTTTAAGCTCATTGGCAAATAA 1035 0.4077 MSLKPSISSDHTMLPLSDPPKNQPDDKLFKGSAMTKRGAYAAISYMSCAVLLVMFNKAALSSYNFPCANVITLLQMVSSLFFLYILRRWRVISFTASESLHISDTSTKFVSLKTLKHTSPLAAAYLLYMLVTMEAVRGVNVPMYTTLRRTTVVFTMLAEFVFVGQRYTQSVVFSVGLIIFGAFVAGARDLSFDGYGYAVVFMANITTAIYLATIARIGKTSGLNSFGLMWCNSILCGPVLLVWTFIRGDLKTTIDFPYLFSPGFLVILLFSCILAFFLNYCIFLNTTLNSALTQTICGNMKDLFTIGFGWIIFGGLPFDFWNVVGQFLGFTGSGLYAYFKLIGK 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04558 344 PANTHER SOLUTE CARRIER FAMILY 35 40 340 - -
Vifa3g04558 344 Pfam Triose-phosphate Transporter family 48 336 IPR004853 -
Vifa3g04558 344 MobiDBLite consensus disorder prediction 1 27 - -
Vifa3g04558 344 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04558 Vifa-Chr3 1306704878 1306707814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04558 10 280 Organic Solute Cotransporters AT2G13650 24.382 5.97e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04558 K15281 - gmx:100819763 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04558 3 1306704878 1306707814 Vifa3g04558 3 1306704878 1306707814 ECH
Vifa3g04558 3 1306704878 1306707814 Vifa2g03990 2 1173433831 1173437961 PCT