Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03990 ATGTCTCATAAACCATCTTATTCATCAGAGAACATGCTTCCAGTGTCCGATCCTCCGAGCGATGAAGACCGAGAGAGGCTTCTCCAAGGCGATGATAAGATCTTTAGAGGTTCTTCCATGGCCAAACGAGGAATTTCCGCTGCTATCTCTTACATGTCTTGCGCTGTGCTGTTGGTGATGTTTAATAAGGCAGCTCTTTCGTCTTATAACTTTCCATCGGTGAATTTCATTGCACTTCTTCAGATGGTATGTTCGTGTTGTTTTCTCTACGTATTAAGGTGGAGGAGAATAATTTCTTTCACATCTGGTGAAGCAGCAATTATATCAGAAAACTCAAAAATATTTGTGCCATTGAAGACTTTGAGGCACACTTTTCCTATTGCAGGATCATATTTACTTTATATGTTAGTCACTATGGAGTCTGTTCGTGGAGTAAATGTTCCAATGTATACCACCCTTAGGAGGACCACAGTAGTATTTACAATGCTTGTGGAGTATATACTGGTGCGGCAACGGTATACGCCTTCTATCATTTTCAGTGTTGGCTTGATTGTCTTTGGTGCATTTATCGCTGGAGCGCGGGACTTATCTTTTGATGCCTACGGTTATGCCATTGTTTTCCTGTCAAACATCGCTACAGCTATATATCTTGCAACGATAGCTCGTGTTGGAAAAACTAGTGGCCTTAATAGCTTTGGTCTTATGTGGTGCAATGGTATCATATCCGGGCCACTTTTGTTTATTTGGACATTAGTTCGGGGTGACTTGACGATGACTATTAATTTTCCTCATCTTCTTTCTCTTGGTTTTATTGTTGTTTTTCTTTTATCCTGCATCCTCGCATTCTTCCTGAACTACAGTATCTTCCTGAACACAACTTTGAATTCAGCTCTGACACAAACAATTTGTGGTAATATGAAGGATCTATTTACTATCGGCTTTGGCTGGATAATTTTTGGTGGGCTACCATTTGATTTTTGGAATGTTATTGGACAATCTCTCGGATTTGCAGGTTCTGGTTTATATGCCTATTATAAACTCATTGGCAAATAG 1053 0.3989 MSHKPSYSSENMLPVSDPPSDEDRERLLQGDDKIFRGSSMAKRGISAAISYMSCAVLLVMFNKAALSSYNFPSVNFIALLQMVCSCCFLYVLRWRRIISFTSGEAAIISENSKIFVPLKTLRHTFPIAGSYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEYILVRQRYTPSIIFSVGLIVFGAFIAGARDLSFDAYGYAIVFLSNIATAIYLATIARVGKTSGLNSFGLMWCNGIISGPLLFIWTLVRGDLTMTINFPHLLSLGFIVVFLLSCILAFFLNYSIFLNTTLNSALTQTICGNMKDLFTIGFGWIIFGGLPFDFWNVIGQSLGFAGSGLYAYYKLIGK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03990 350 MobiDBLite consensus disorder prediction 1 15 - -
Vifa2g03990 350 PANTHER SOLUTE CARRIER FAMILY 35 46 346 - -
Vifa2g03990 350 Pfam Triose-phosphate Transporter family 55 342 IPR004853 -
Vifa2g03990 350 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03990 Vifa-Chr2 1173433831 1173437961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03990 17 239 Organic Solute Cotransporters AT2G13650 26.293 4.74e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03990 K15281 - gmx:100778544 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03990 2 1173433831 1173437961 Vifa2g03990 2 1173433831 1173437961 ECH
Vifa3g04558 3 1306704878 1306707814 Vifa2g03990 2 1173433831 1173437961 PCT