Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04078 ATGGATGATGACTCAAAAAGATTGTCTATTATTGAGGAGCAGCTCAACCACATCCTACGTGGATGTGAAGATGATGAGAAAGTGGCTCGGACCAGTTTCTCCATGGGTTTCACTTTCACCCACATGGACAGAAGGCTCCACCAAATGTTGTTTGCTGATAGAGATTATGAGAGTGCTGGAGTAACCACAACAAATGTTGATTATCCTCCTTCTTTCAGGCCTAATATCAGAATAGAACGTATTGAAGAAAAAGGCTACTCAGTTGTTAGTGTGAAATGCAAAGATCGGGCAAAATTGATGTTTGACATTGTCTGCACTCTCACTGACATGGAATATGTTGTTTTTCATGCCTCAATCTCATCTGAAGGCCCTTATGCATCACAGGAGTATTTCATCAGGCACGTGGATGGGTGCACACTTGACACTGAAGGGGAGAAAGAAAGGGTCGTCAAATGCATTGAAGCTGCTATTCAAAGAAGAGGTGTGAGCCTTGAGCTGTGTGCAAAGGATAGAGTGGGCTTGCTGTCTGAAGTGACTAGGATTCTACGAGAAAACGGCTTGACAGTTTGTAGGGCAGGTGTATCAACTATTGGAGAGAAAGGACTAAATGTTTTCTATGTGAGAGATGCATATGGAAACCCTGTGGACATGAACATTATTGATGCACTGCGTAAAGAAATCGGCCAGACTGTAATGGTCAACGTGAAGAAGGTACCAGCCAACACGAAAGCACCAGAAACATCCCGAGGATGGGCTAGAGTAAGCTTCTTCTTTGGGAACTTGTTGGAAAGGTTCTTGACTTGA 804 0.4353 MDDDSKRLSIIEEQLNHILRGCEDDEKVARTSFSMGFTFTHMDRRLHQMLFADRDYESAGVTTTNVDYPPSFRPNIRIERIEEKGYSVVSVKCKDRAKLMFDIVCTLTDMEYVVFHASISSEGPYASQEYFIRHVDGCTLDTEGEKERVVKCIEAAIQRRGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGVSTIGEKGLNVFYVRDAYGNPVDMNIIDALRKEIGQTVMVNVKKVPANTKAPETSRGWARVSFFFGNLLERFLT 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04078 267 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 236 IPR040217 -
Vifa3g04078 267 SUPERFAMILY ACT-like 160 228 IPR045865 -
Vifa3g04078 267 CDD ACT_ACR_3 86 160 - -
Vifa3g04078 267 ProSiteProfiles ACT domain profile. 163 240 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04078 Vifa-Chr3 1201096534 1201098315 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04078 - - gmx:121172621 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04078 3 1201096534 1201098315 Vifa3g04078 3 1201096534 1201098315 ECH
Vifa3g04078 3 1201096534 1201098315 Vifa2g02823 2 789589182 789592376 PCT