Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02823 ATGGGTGCAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAATTTCAGCGATAGAATCAACCCTCCAAGGGTATCAGTGGACAATGCTAGTTGCCATAACTGTACATTAATCAAGTTTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTTGTGCAAATTTTGACAGACCTTGACTTTATAATTACCAAAGCTTACATATCTTCTGATGGGGGATGGTTCATGGATGTCTTTCATGTCACGGATCAGCATGGAAAAAAGATAACAGATGACAAAACCATTGACCTCATTGAAAAGGCTCTAGGACCGAAAAGCCAGAGTAAAGAAGGAGTGAAAAATTGGGCAGGAAAACGCGTCGGGGTGCATTCTGTTGGTGATCATATAGCCATTGAGCTAATAGGGAGAGACCGCCCCGGTCTTTTGTCTGAGATATCAGCTGTCCTTGCCAGCCTCCATTTTAACGTGGTTGTAGCTGAAGTTTGGACTCATAACCGAAGAATAGCTTGTGTCCTTTATGTCAATGACGGTACGAGACAAGCTGTGGATGATCCTAAAAGATTGTCTCTTGTGGAGGAGCAGCTCAATAACATCTTACGCGGATGTGAGGACAGTGATAAAGTTTCTAGTAGAACTAGTCTCTCCATGAGTTTCACACATATCGATAGGCGGCTCCATCAAATGCTGTTTGCTGATCGAGATTATGAAAGCTTTGGAGTAACGACGACAGACAGTGAATGTTCTCCCTCTTTCCGGCCTAAAATAGCGATAGAATGTTGCAAGGAAAAAGGTTACTCAGTGGTTAGTGTCAGGTGCAAAGATCGCGCAAAACTCATGTTTGACATTGTTTGCACTCTTACTGATATGCAATATGTTGTTTCCCACGCCACTATCTCATCAGACGTCCCTTACGCGTCCCAGGAATACTTTATTCGGCACATGGACGGATGCACGCTTGATACAGAAGGAGAGAAAGAAAGGGTCATCAAATGCCTTGAAGCTGCTATTCAAAGAAGAGTGAGCGAGGGTGTGAGCCTTGAATTGTGTGCAAAGGATAGAGTGGGATTGCTGTCTGAAGTAACAAGGATTCTAAGAGAGAATGGCCTAACAGTTTGTAGGGCTGGTATATCAACTAGAGGGGAAGAAGCACTTAATGTCTTCTATGTGAGGGATGCATCAGGGAACTCAGTGGACATGAAAACTATAGAAGCACTTCGTAAAGAAATAGGCAAGACAATGATGGTAGATGTTAAGAAGGTACCAGCATATTACAAAGAACCAGAGACAAAAGGATGGGCTAAAACTAGCTTCTTCTTTGGTAACTTGTTGGAAAGGTTCTTGGCTTAA 1347 0.4276 MGAVCWPYFDPEYENFSDRINPPRVSVDNASCHNCTLIKFDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQHGKKITDDKTIDLIEKALGPKSQSKEGVKNWAGKRVGVHSVGDHIAIELIGRDRPGLLSEISAVLASLHFNVVVAEVWTHNRRIACVLYVNDGTRQAVDDPKRLSLVEEQLNNILRGCEDSDKVSSRTSLSMSFTHIDRRLHQMLFADRDYESFGVTTTDSECSPSFRPKIAIECCKEKGYSVVSVRCKDRAKLMFDIVCTLTDMQYVVSHATISSDVPYASQEYFIRHMDGCTLDTEGEKERVIKCLEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGISTRGEEALNVFYVRDASGNSVDMKTIEALRKEIGKTMMVDVKKVPAYYKEPETKGWAKTSFFFGNLLERFLA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02823 448 Gene3D - 128 204 - -
Vifa2g02823 448 ProSiteProfiles ACT domain profile. 345 422 IPR002912 -
Vifa2g02823 448 SUPERFAMILY ACT-like 125 200 IPR045865 -
Vifa2g02823 448 SUPERFAMILY ACT-like 341 411 IPR045865 -
Vifa2g02823 448 CDD ACT_ACR_3 265 339 - -
Vifa2g02823 448 Pfam ACT domain 37 85 IPR002912 -
Vifa2g02823 448 Pfam ACT domain 131 199 IPR002912 -
Vifa2g02823 448 Gene3D - 340 420 - -
Vifa2g02823 448 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 10 418 IPR040217 -
Vifa2g02823 448 ProSiteProfiles ACT domain profile. 130 211 IPR002912 -
Vifa2g02823 448 CDD ACT_ACR_4 343 414 - -
Vifa2g02823 448 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
Vifa2g02823 448 SUPERFAMILY ACT-like 32 105 IPR045865 -
Vifa2g02823 448 CDD ACT_ACR_1 35 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02823 Vifa-Chr2 789589182 789592376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02823 - - ahf:112706001 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02823 2 789589182 789592376 Vifa2g02823 2 789589182 789592376 ECH
Vifa3g04078 3 1201096534 1201098315 Vifa2g02823 2 789589182 789592376 PCT