Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04055 ATGACTATGCAAAAGGGTAACAACAACAACCATCAAAAGTCATTTGAAGTTTCCATTGATTCCAAAGTTGTGGTTGTGTTGTTCACTAATACAAGTAAGACATCAGACACATTTTTGTTCAGAGATTTCGATGAGAGTCTCCAAACTCGTGTTTTGTTGCCCAAAAAACAGGAAACAAAATGGACAGGAAGTGCACACATAATAACCGCAGTTATTGGTTCTGGAGTGCTGTCATTGGCATGGGCTATAGCTCAACTTGGATGGATTGCTGGTCCATCAATGATGCTTCTTTTCGCTTTTATTATTTATCACACTTCCACTCTTCTCTCTGTTGGTTATCGTACCGGGGACCAACTTAATGGCAAAAGAAATTATACTTACACTCAAGCTGTTGGTGCATATCTTGGTGGTTATAAGGTCAAAATTTGTGGAATTATTCAATATGTTAATCTTTTTGGTGTTGCCATTGGATACACTATAGCAGCTTCTATAAGCATGATGTCTAATTGTTTTCATAATAGTGGAGGAAAAGATCCATGTCGTATGAATGGAAATCTTTACATGATTTCTTTTGGTATTGTTGAAATATTTTTCTCTCAAATTCCAGACTTTGATCAGTTATGGTGGCTCTCTTCTTTAGCTGCTGCTATGTCTTTTACATACTCAACTATTGGTCTTGGTCTTGGTGTTGGGAAAGTTATAGAAAACAAAGGCATTAAAGGAAGCTTAACTGGTATAACCGTTGGTACTGTCACACAAACCCAAAAAGTTTGGAGGAGCTTCCAAGCTCTTGGTAACATAGCTTTTGCATACTCTTACTCACTCATCCTTATAGAAATTCAGGTAAAATCTATTAATCTTAACAAAAATTTGTAA 876 0.363 MTMQKGNNNNHQKSFEVSIDSKVVVVLFTNTSKTSDTFLFRDFDESLQTRVLLPKKQETKWTGSAHIITAVIGSGVLSLAWAIAQLGWIAGPSMMLLFAFIIYHTSTLLSVGYRTGDQLNGKRNYTYTQAVGAYLGGYKVKICGIIQYVNLFGVAIGYTIAASISMMSNCFHNSGGKDPCRMNGNLYMISFGIVEIFFSQIPDFDQLWWLSSLAAAMSFTYSTIGLGLGVGKVIENKGIKGSLTGITVGTVTQTQKVWRSFQALGNIAFAYSYSLILIEIQVKSINLNKNL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04055 291 Pfam Transmembrane amino acid transporter protein 58 281 IPR013057 -
Vifa3g04055 291 PANTHER OS05G0424000 PROTEIN-RELATED 58 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04055 Vifa-Chr3 1195350486 1195351643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04055 40 281 Organic Solute Cotransporters AT5G09220 68.293 2.43e-118 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04055 K24917 - twl:119996372 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04055 3 1195350486 1195351643 Vifa3g04055 3 1195350486 1195351643 ECH
Vifa2g03248 2 930556864 930559167 Vifa3g04055 3 1195350486 1195351643 PCT