Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03002 ATGCAATCAGCACTTAACAAAAAAGAGGTCTCTCAAACATCTCAAGGTTGCTGTCCAAACTTATTGTTCATCAATTCATCACTCCTTTCTCACAACAATAACACAGTTACCAAACCCAGAAACAGCTCTTCGCAATGTCGACAAACCTTTGCAGCAACAACATCGTCCTCTATTTTTCCAAACACAAAATTCACAAACCATGAATCTCTTCCATCGCTTCATGAATCATACACTGAATTCAACAGAGTTTATCCTCAATTCTCTGAGACTCAGAAAATCGACAGTTTGAGAGCCAGAGAATACTATCATCTCTCTTTCTTAAATCAATCTTGTCTTGATTATATTGGTATTGGTCTTTTCTCTTACTTACAACGCCAACAACATGATGCTTCGAAAACTCAACTTTCTTCTCCTTCAACTTCAACACCTCAATCTCCACTGCAATATGCTGATATACCCTTTTTTAGTATCTCCTACAAAACAGGAAACTTGAAGACTTTATTGCTTCATGGAGGGAATGAGTCGGAATTTGAGTCTTCAATGAGGAGAAGGATAATGAAGTTTCTCAACATTTCTGAAAATGATTATTTCATGGTTTTAACAGCAAATAGAACATCGGCTTTCAAACTTGTGGCAGATTCATATCCATTTCAATCTTGTAAGAAGCTTCTTACAGTTTATGACTATGAAAGTGAAGCAGTGGAAGCAATGGTTGGCTCTTCGGAAAAAAGAGGAGCGAAATCAATGTCAGCTGAATTCTCATGGCCAAGACTAAGGATTCAATCAACAAAATTGAAAAAGATGATTGTTAGTGATAACAATAAGAGGAAGAAAAACAAAAAAACTGGTCTTTTTGTATTCCCACTTCATTCAAGGGTGACAGGAGCAAGGTATCCTTATCAATGGATGAGAACGGCTCAAGAGAATGGTTGGCATGTTTTGATTGATGCTTGTGCATTAGGACCAAAAGACATGGACAGTTTTGGTCTCTCTCTCTTTCAACCAGATTTTCTCATTTGTTCATTCTACAAAGTTTTTGGAGAAAATCCATCTGGTTTCGGTTGCCTTTTTGTCAAGAAATCTTCTATTTCCCTTCTTGAATCTTCCTCTTGTGCAGGAATTGTCAACCTTGTACCAGAGAGAAATCTTCTGAACAATCTATCAGAAAATTATTCTACTTCTAGTAATAATAGTCAAGTAGAAATTATTGATCCAAAAAAACCACCATCTATCTTACAAGAACAAGAATTATCTTCTTTGATTTCTTTCTCTGGACGGATGCAAACTCCACAATTTGTTAAAGTTGAAGCAGATCCAAAAGCTCCAGAAGGTTCTGGAACTGATGAGGCGAAAAGGGTAGTTGAGAACAAACAAATTAAGATTGTAGAAGATAGTAAAAACGGGAGCTTTGACATTGAATGCAGGTGTTTGGACCAAGTGGACTCTTTAGGATTGACACTGATAACCAACAGAGGAAGGTACCTGATAAACTGGCTAGTGAACTCATTGCTGAAGCTAAAGCACCCTAGTGACGAAGGGGTTCCATTAGTAAAGATCTATGGTCCTAAGATACGATTCGATAGAGGACCTGCTTTGGCTTTCAATGTTTATGATTGGAAAGGTGAAAAAGTTGAGCCTGTTTTAGTACAGAAACTTGCTGATAGAAACAATATATCTGTCAGCTATGGATTTCTGCATCATATTTCGTTTGCAGATAAGTATTCAGAAGAGAAGGGAAGAGTCCTACAGAGTAAAGAAGGAAGAGGTGAGAAAGTAGAGACGAACAAGAACAAAGATAGAGATAATAACTTGGGAGTGACAGTGGTTACTGCTGCATTAAGCTTCTTGGCTAATTTCGAAGATGTCTATAAACTATGGACTTTTGTTGCTCGGTTCCTTGATGCAGATTTTGTGGAGAAGGAGAGGTGGAGGTATACTGCTCTTAATCAGAAAACAATTGAAGTTTAA 1968 0.3735 MQSALNKKEVSQTSQGCCPNLLFINSSLLSHNNNTVTKPRNSSSQCRQTFAATTSSSIFPNTKFTNHESLPSLHESYTEFNRVYPQFSETQKIDSLRAREYYHLSFLNQSCLDYIGIGLFSYLQRQQHDASKTQLSSPSTSTPQSPLQYADIPFFSISYKTGNLKTLLLHGGNESEFESSMRRRIMKFLNISENDYFMVLTANRTSAFKLVADSYPFQSCKKLLTVYDYESEAVEAMVGSSEKRGAKSMSAEFSWPRLRIQSTKLKKMIVSDNNKRKKNKKTGLFVFPLHSRVTGARYPYQWMRTAQENGWHVLIDACALGPKDMDSFGLSLFQPDFLICSFYKVFGENPSGFGCLFVKKSSISLLESSSCAGIVNLVPERNLLNNLSENYSTSSNNSQVEIIDPKKPPSILQEQELSSLISFSGRMQTPQFVKVEADPKAPEGSGTDEAKRVVENKQIKIVEDSKNGSFDIECRCLDQVDSLGLTLITNRGRYLINWLVNSLLKLKHPSDEGVPLVKIYGPKIRFDRGPALAFNVYDWKGEKVEPVLVQKLADRNNISVSYGFLHHISFADKYSEEKGRVLQSKEGRGEKVETNKNKDRDNNLGVTVVTAALSFLANFEDVYKLWTFVARFLDADFVEKERWRYTALNQKTIEV 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03002 655 Gene3D Aspartate Aminotransferase, domain 1 469 641 IPR015422 GO:0003824
Vifa3g03002 655 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 74 615 - -
Vifa3g03002 655 Gene3D - 169 397 IPR015421 GO:0003824
Vifa3g03002 655 SUPERFAMILY PLP-dependent transferases 176 375 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03002 Vifa-Chr3 852682365 852684332 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03002 - - gmx:100820534 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04125 1 636083067 636084965 Vifa3g03002 3 852682365 852684332 ECH
Vifa3g03002 3 852682365 852684332 Vifa3g03002 3 852682365 852684332 ECH
Vifa1g04125 1 636083067 636084965 Vifa3g03002 3 852682365 852684332 PCT