Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04125 ATGGATATCCTTAACCAAAATGAATCGTCACAAACATGTCCTCAACAATGTTGTTGCACAACCTCAATTTTCACCTCACCAAACTCCCAAACCTCAAAATCACCAAAACACAGAAACAGTTCATCAGAATGTCGCCACACTTTTGCATCCTCAACAACATCCTTAATCTTCCCAAACACTCATTTTACAAACCATGAATCTCTTCCATCCTTTCAAGAATCATTCATTGAATTCAACAAAGTTTATCCTCAATACTTCGAGACAGAACAGCAATATCATCATCTTCATGATTCATCCAAAACCGAACTCTCGGTTCATCAGAAAACACGAGATTATTCACCTCGGTTTTCTGATATGCCTTTCTTTAGTATCTCCTGCAAAACTGGATTCTTGAAGACTTTACTTCTTCATGGTGGAAAAGACTCCGAATTCGAGTCTGCAATGAGAAAAAGAATCATGAATTATCTTAACATATCGGAAAACGATTACTACATGGTTTTTACAGCTAATAGAACATCAGCTTTCAAGCTTGTAGCAGATTGTTATCAGTTTCAAAAGAGTAGAAAGCTTTTGACAGTTTATGACCACGAGAGCGAAGCGATTGAAGCGATGATTAGTTCGTCAGAGAAACGAGGAGCGAAAGCTATGTCTGCTGAGTTTTCATGGCCAAGGCTAAGAATTCAGTCAACAAAGTTAAGGAAAATGATTGTGAGTAATAGAAAGAACAAGAAGAACAAGAAGGGTCTATTTGTTTTGCCTCTTCATTCGAGAGTAACCGGATCGAGGTATCCTTATATATGGATTAGTATAGCTCAAGAGAATGGTTGGAATGTTTTGGTTGATGCCTGTGCATTAGGATCAAAGGACATGGATTGTTTCGGTCTTTCGCTTTTTCAACCTGATTTTCTTATCTGTTCTTGTTATAAAGTTTTCGGTGAAAACCCTTCTGGTTTCGGTTGCCTTTTCATCAAGAAAACTTCGATTTCCATGTTGGAGACAAACTCTTCTGTGGGAATAGTAAATCTTGTACCCGAAAAAAATCTGCAAGATTCATCATTACTTACCTTACATTTACAAGAAGAAGAACCGTTTTATTTGACATCTTTACCTGCAAAGTTCGAGAAAGGAGAAGCATCTGAGATTAAGATCATAGATCCACATGAAGAGTCAAAACCATCACAAAAGTTCGAAATCGAAGAAGTGGATGATAAGCAAGTTCAAATCCTTCAAAAGGGTGTTACTGTTAAAGAAAGTGATAAAAACGAAAACTTTGATATTGAATGTAAGTGTTTAGACCAAGTTGATTCATTAGGATTGATACTGATAAATGATAGAGCAAGGTACTTGATTAACTGGTTGGTGAATTCGCTGTCGAAGCTTAAGCATCCAAACACAGAAGGTGTTCCTCTAGTGAAGATTTATGGTCCGAAAGTTAAATTCGATAGAGGGCCTGCAATTGCGTTCAATGTATTCGATTGGAAAGGCGAAAAAGTTGAACCTGTTCTTGTTCAGAAGCTTGCTGACAGAAGTAGTATTTCGATTAGCTACGGATTGTTGCATCATATATGGTTTGCAGATAAGTATGGAGATGAAAAGGGGAGGATTTTAAAGGATGGAAAAAAGAAAGATAGAGAGAAAGATGGAATAAGTGTTGTTACTGCTGCATTAGGGTTTTTGGCGAATTTTGAAGATGTGTATAAGCTTTGGTCTTTTGTTGCTAGGTTTCTTGATGCTGATTTTGTTGAGAAGGAGAGGTGGAGATATACTGCTCTCAATCAGAAAACAGTTGAGGTTTAA 1797 0.3712 MDILNQNESSQTCPQQCCCTTSIFTSPNSQTSKSPKHRNSSSECRHTFASSTTSLIFPNTHFTNHESLPSFQESFIEFNKVYPQYFETEQQYHHLHDSSKTELSVHQKTRDYSPRFSDMPFFSISCKTGFLKTLLLHGGKDSEFESAMRKRIMNYLNISENDYYMVFTANRTSAFKLVADCYQFQKSRKLLTVYDHESEAIEAMISSSEKRGAKAMSAEFSWPRLRIQSTKLRKMIVSNRKNKKNKKGLFVLPLHSRVTGSRYPYIWISIAQENGWNVLVDACALGSKDMDCFGLSLFQPDFLICSCYKVFGENPSGFGCLFIKKTSISMLETNSSVGIVNLVPEKNLQDSSLLTLHLQEEEPFYLTSLPAKFEKGEASEIKIIDPHEESKPSQKFEIEEVDDKQVQILQKGVTVKESDKNENFDIECKCLDQVDSLGLILINDRARYLINWLVNSLSKLKHPNTEGVPLVKIYGPKVKFDRGPAIAFNVFDWKGEKVEPVLVQKLADRSSISISYGLLHHIWFADKYGDEKGRILKDGKKKDREKDGISVVTAALGFLANFEDVYKLWSFVARFLDADFVEKERWRYTALNQKTVEV 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04125 598 Pfam Aminotransferase class-V 147 334 IPR000192 -
Vifa1g04125 598 Gene3D Aspartate Aminotransferase, domain 1 428 574 IPR015422 GO:0003824
Vifa1g04125 598 Gene3D - 137 385 IPR015421 GO:0003824
Vifa1g04125 598 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 125 559 - -
Vifa1g04125 598 SUPERFAMILY PLP-dependent transferases 146 332 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04125 Vifa-Chr1 636083067 636084965 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04125 - - aprc:113867925 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04125 1 636083067 636084965 Vifa3g03002 3 852682365 852684332 ECH
Vifa1g04125 1 636083067 636084965 Vifa1g04125 1 636083067 636084965 ECH
Vifa1g04125 1 636083067 636084965 Vifa3g03002 3 852682365 852684332 PCT