Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02916 ATGGCCTCAGAGTTTATCTTAAGGAGTTTGGTTATAGTTTCCCTTGTCACATCCCTAGCGCTGCCAGGCTCTCTCGGAGCAATAGAGTGCGAGAATCTAAGCAAGGAAACATGTTCATTTGCTGTTTCATCTAGCAGCAAAAGGTGTGTCCTAGAGAAATATGTGAAAAGATCAGGTGAAGAAGCATACACATGCAAAACATCAAATATTGAAACTGATAAACTGAAAGATCACATTGAAAGCGACCAGTGCATAAAAGCTTGTAATTTAGACAGATTATCACTTGGAATTTCATCAGACGCACTTCTGGAATCTCGTTTCATAGCAAAGTTATGTTCTCCACAGTGTTACAAGAGTTGTCCAAATGTTGTTGATCTTTACTTCAACCTAGCAGCCAGTGAAGATGTGTTTCTTCCTAAGTTGTGTGAGATGAAAGGTGGAAATGCTCGCCGCATAATGGCGGAATTGAAAAGCTCCGGTATTGTGGCACCGGGACCTGTGGATCAAATGTTGTTTGCAGCATCATCTCCACAATCATTTAGTTCTGTTGAGTTTGCAGCTGAGCCTATGGCTGCAGATCTATCATGA 588 0.415 MASEFILRSLVIVSLVTSLALPGSLGAIECENLSKETCSFAVSSSSKRCVLEKYVKRSGEEAYTCKTSNIETDKLKDHIESDQCIKACNLDRLSLGISSDALLESRFIAKLCSPQCYKSCPNVVDLYFNLAASEDVFLPKLCEMKGGNARRIMAELKSSGIVAPGPVDQMLFAASSPQSFSSVEFAAEPMAADLS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02916 195 PANTHER PAR1 PROTEIN 9 173 IPR009489 -
Vifa3g02916 195 Pfam PAR1 protein 28 171 IPR009489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02916 Vifa-Chr3 820171028 820171689 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02916 - - psat:127092660 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02916 3 820171028 820171689 Vifa3g02916 3 820171028 820171689 ECH
Vifa1g04346 1 675232390 675233052 Vifa3g02916 3 820171028 820171689 PCT