Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04346 ATGGCTCTTAACATTCGCTTGATATGTTTGGTAACAATTGCTCTTGTACTTTTTGTTGCTGTTCAAGGGACTCTTGGAGGAGGCATTGAATGTGAGAATTTGAAGGAAGATAGATGTGCATTTGCAGTATCATATGGTGGAAAACGTTGTGTACTTGAGAAGCATGTGAAGAGAAATGGTTTAGAAAAATATACATGTAAGACGTCAGAGATTGAAGCTGATGATAAATTGAAAGATCATATAGAAAGTGATGAATGTATTAAATCTTGTGGTTTGGAGAGAAAATCATTTGGAATTTCATCTGATTCTCTAGTTGAATCTAGTTTCACACAAAATCTTTGTTCTCCTCAGTGTTACAAAACTTGTCCCAATATTGTTGATCTATACTTCAACCTTGCTGCTGGTGAAGGTGTGTTTCTTCCCAACTTATGTCAAGCTCGTAGACAAATGGCTGAGATCAAAAGCTCTGCCATTGTTGCACCTCCACCATATCATTCTCTTCAATTCTTTGCTACTTCTCCACAATCTTCTTATCAAGACAGTAAACTCACGGCTACTGCACCTGCACTCTCACCATTCTATTGA 585 0.3744 MALNIRLICLVTIALVLFVAVQGTLGGGIECENLKEDRCAFAVSYGGKRCVLEKHVKRNGLEKYTCKTSEIEADDKLKDHIESDECIKSCGLERKSFGISSDSLVESSFTQNLCSPQCYKTCPNIVDLYFNLAAGEGVFLPNLCQARRQMAEIKSSAIVAPPPYHSLQFFATSPQSSYQDSKLTATAPALSPFY 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04346 194 Pfam PAR1 protein 29 192 IPR009489 -
Vifa1g04346 194 PANTHER PAR1 PROTEIN 11 192 IPR009489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04346 Vifa-Chr1 675232390 675233052 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04346 - - gmx:100778782 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04346 1 675232390 675233052 Vifa1g04346 1 675232390 675233052 ECH
Vifa1g04346 1 675232390 675233052 Vifa3g02916 3 820171028 820171689 PCT