Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02787 ATGGAGGTTGAGTTGGGTCTCAAGATCACAAGAACAAAAGATGACAGCACTTCCATTTCAGATTTTCAGTTTGCCAAAGATAGAGCAGGTCCTATCTTCTTATCTAAAGAAACCGATTCAACTTTCAGCCTCACAGCACATCTCAAAGGTTATAAGAAAGAGAACATTGACATCAACATTAACAAAGATGGTACAAAGATTTCAGTGAGTGGTGAAAAGGAGGTGCAGGAAATGCAAATGGTACCATTCAAGAAAGAGGTGAAAACAAAAGGGTTTAGAAAGAAGTTTGAAATCCCTAATGGAGTTATTTTGGATAAGATCAAGGCTAAGTATAACGAAGAGGAAGGACTATTGACAATAGTGATGCCAAAAATTGCAAAAGGTATATTGTGTGGGGTGGGAATAGAAGAAGTGAAGGAAGAAGAGGGTGCAAATAGTATTGTATCAGAACCAGAACAAATCGTAGCAGAAGAAGAAAAGGTTTTAGAGCATAAGAGTGAAGAGGAAAATGCTCCTGTGAAGAAGAGACGTTCTAGAAAACCATGGCATCCTTGTCCTCCTTTGGTTTTTGGAGGATCAACTTTGCTAGCATCTATTATCTTTCTTGTTTTGCACTATATAAGAGTGAGAAAGAGTTGA 639 0.3787 MEVELGLKITRTKDDSTSISDFQFAKDRAGPIFLSKETDSTFSLTAHLKGYKKENIDININKDGTKISVSGEKEVQEMQMVPFKKEVKTKGFRKKFEIPNGVILDKIKAKYNEEEGLLTIVMPKIAKGILCGVGIEEVKEEEGANSIVSEPEQIVAEEEKVLEHKSEEENAPVKKRRSRKPWHPCPPLVFGGSTLLASIIFLVLHYIRVRKS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02787 212 PANTHER HEAT SHOCK PROTEIN 26 1 172 - -
Vifa3g02787 212 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 23 141 IPR002068 -
Vifa3g02787 212 Pfam Hsp20/alpha crystallin family 36 125 IPR002068 -
Vifa3g02787 212 Gene3D - 9 129 IPR008978 -
Vifa3g02787 212 MobiDBLite consensus disorder prediction 161 181 - -
Vifa3g02787 212 MobiDBLite consensus disorder prediction 161 175 - -
Vifa3g02787 212 SUPERFAMILY HSP20-like chaperones 36 126 IPR008978 -
Vifa3g02787 212 CDD ACD_sHsps-like 36 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02787 Vifa-Chr3 772610520 772611263 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02787 - - aprc:113873754 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04707 1 735268831 735273834 Vifa3g02787 3 772610520 772611263 PCT