Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02763 ATGGCAGCAAAGCGCGTGTACCAAGTTTGGAAAGGAAGTAATAAATTCATATTTGGAGGGAGATTGGCATTTGGGCCTGATGCGAGATCTCTACTTATCACTTTTTCGCTGATTATTGTTCCGGTCATCATCTTTTGTGCATTTGTAGCAAGACATCTTCGGCATGAATTTTCTTCATATTATTCGGGATATGCTATTTTAGTAGCGGCAATTCTCTTTACTATCCATGTCCTGGTGCTCCTTGGTCTTACTTCCGCGCGCGATCCGGGTATTGTTCCAAGGAATTCACATCCACCGGAAGAAGAGTTTCGATATGAGTCTTCTGGGGTAGGCGGACAACAAACGCCAACCCTTCAGTTCCCAAGAACAAAAGAAGTAATGGTCAATGGCATTCCTGTGAAGGTGAAATATTGTGAAACTTGTATGCTGTATCGTCCTCCTCGTTGCTCGCATTGCTCCATATGCAACAACTGTGTTGAGCGTTTCGATCACCATTGTCCTTGGGTGGGCCAATGCATTGGACTGAGGAACTACCGTTACTTCTTTCTGTTTGTTTCTTCCGCAACGATTCTGTGTGTCTACGTGTTTTCTCTATCGGCTTATTACATCAAGGTTTTGATGGATAATAATAACAATGGTACAGTGTGGAAGGCCATAAAAGAATCCCCGGCATCTGTGATATTAATGGCATATTGTTTCATCTCTCTGTGGTTTGTTGGTGGACTAACCGGTTTTCATCTGTACCTTATCGGCTCAAACCAGACAACCTATGAAAACTTCCGGTACAGAGCGGATGGCAGGATCAATGTTTTTAATCGCGGTTGTTTAAATAATTTTCTGGAAGTGTTTTGCACAGAAATAAAGCCATCCAGGAACAATTTCAGGGCTTTTGTTCAAGAGGAGGTGCAAAGGCCTCTGACTCCGGTCTTTACCCGGGGACATGAACCAGGTGATATGAGTGGTGATCGTCGTCCTAAAGTTGAACATGATCTAGATATCGGTGAAGATCTATTGAAGATATCACAGCGTAGGAATATTGAAGAGCTCGACGAGGACACCCGGAGTAGAGGGAGCAATGGTGCGCCCCATAATACAGGTGATCCCGATTCAATTCTGTCCTCAGATCATCGAGCTGCCACAATACGATCTGATGCTAGGCACTCGAGTTGGGAAAGAAGTGGAAACTGGGAAATCGCACAAGATGACTTTGCCAATTCGAATGTCACAGAAAGCAGAAATCATGTCACATCAAAGGAAATGCGCCAATGA 1269 0.4405 MAAKRVYQVWKGSNKFIFGGRLAFGPDARSLLITFSLIIVPVIIFCAFVARHLRHEFSSYYSGYAILVAAILFTIHVLVLLGLTSARDPGIVPRNSHPPEEEFRYESSGVGGQQTPTLQFPRTKEVMVNGIPVKVKYCETCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFLFVSSATILCVYVFSLSAYYIKVLMDNNNNGTVWKAIKESPASVILMAYCFISLWFVGGLTGFHLYLIGSNQTTYENFRYRADGRINVFNRGCLNNFLEVFCTEIKPSRNNFRAFVQEEVQRPLTPVFTRGHEPGDMSGDRRPKVEHDLDIGEDLLKISQRRNIEELDEDTRSRGSNGAPHNTGDPDSILSSDHRAATIRSDARHSSWERSGNWEIAQDDFANSNVTESRNHVTSKEMRQ 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02763 422 MobiDBLite consensus disorder prediction 307 326 - -
Vifa3g02763 422 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 39 301 - -
Vifa3g02763 422 ProSiteProfiles DHHC domain profile. 136 186 - -
Vifa3g02763 422 MobiDBLite consensus disorder prediction 393 413 - -
Vifa3g02763 422 MobiDBLite consensus disorder prediction 342 422 - -
Vifa3g02763 422 MobiDBLite consensus disorder prediction 342 357 - -
Vifa3g02763 422 Pfam DHHC palmitoyltransferase 136 261 IPR001594 GO:0016409
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02763 Vifa-Chr3 766513568 766515616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02763 65 286 Lipid Metabolism Gene Families AT4G22750 30.043 1.39e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02763 K16675 - gmx:100820208 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04657 1 728503670 728512140 Vifa3g02763 3 766513568 766515616 PCT