Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02186 ATGGATTCAATTAAATTGATTCTGATTTTGTTAATCTCTTTAACACTATCATCATCATCATCATCATCATCGTCGTCGTCGTCATCGAATGCATTGATTCAACAGAACAATCTCTCAGCTTACGATCTTCTCATGGAATACGGTTTCCCAAAGGGTCTTCTTCCAAAAGGAGCAATCGGGTATACCTTAAACAGAGAAACAGGTCAATTTTCAGTGTTTTTTGAGAAAACATGTAGTTTTACGATAGAAAGTTACACGCTTAGTTACAAGAGTACTATCTCGGGTGTGATTTCGAAGAATAGGCTTTATAAACTCAAGGGTATTTCCGTCAAGATTGTGATTTTGTGGTTGAGTATTGTTGAGGTTTCTCGTGACGGTGATGATATTGGTTTTTCTGTCGGTATTACTTCTGCCAATTTTGGGGCGGAGAATTTCCTTGAATGCCCTCAGTGTGGATGTGGATTCGATTGCGATGATTATAAGCTTCATTTAAACGGTGACGTTTCTTCAATTTAG 516 0.3779 MDSIKLILILLISLTLSSSSSSSSSSSSSNALIQQNNLSAYDLLMEYGFPKGLLPKGAIGYTLNRETGQFSVFFEKTCSFTIESYTLSYKSTISGVISKNRLYKLKGISVKIVILWLSIVEVSRDGDDIGFSVGITSANFGAENFLECPQCGCGFDCDDYKLHLNGDVSSI 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02186 171 PANTHER T31J12.3 PROTEIN-RELATED 17 152 IPR007493 -
Vifa3g02186 171 SUPERFAMILY At5g01610-like 11 157 IPR036758 -
Vifa3g02186 171 Gene3D - 18 148 IPR036758 -
Vifa3g02186 171 Pfam Protein of unknown function, DUF538 40 145 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02186 Vifa-Chr3 548141002 548141517 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02186 - - gmx:100500182 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02186 3 548141002 548141517 Vifa3g02186 3 548141002 548141517 ECH
Vifa5g03504 5 1147941542 1147942567 Vifa3g02186 3 548141002 548141517 ECH
Vifa5g03504 5 1147941542 1147942567 Vifa3g02186 3 548141002 548141517 PCT