Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02031 ATGAACACAATCACCCTCCTTCGAAACCGCGCTATAATTTCCGCGCGAAGAGTCCTCGTTGCTTCCAACAATCCATCGTTTTTGCTTTCTCCACTACATCACCATACCATTGATTTGCCACAACCACGTTTCAATCTTCACCACCCTTTTCGAATACTAGGGTTTCAAATTAACGATGTTTCAACTATTGCAAGAGCTGGATTCAAGTTTCAAAGTTTCTCAACTTCCATTGAGACACGTGGAAGTGAGAATAGTTTTGAGAGGATTTATATTCAGGGTGGTATGAATGTGAAGCCGTTCACGGTGGAGAGTGTTCATAAGGGCGAAGAGAATGGTGTAAGAGAAGAAGAGTCTGTTGTGGAAAAACAAGCTTGGAAGTTGTTGAAGGATGCTATTGTGACTTATTGTGGGAATCCTGTGGGGACAGTGGCTGCAAATGATCCAGGTGATAAATCGCCGTTGAATTACGATCAAGTTTTTATTAGGGATTTTATTCCTTCTGCTCTTGCTTTCTTGCTTAAAGGAGATGATGAGATTGTCAAGAACTTTCTTCTTCATACCTTGCAATTACAGAGTTGGGAGAAAACTGTGGACTGCTACAGTCCAGGACAGGGCTTGATGCCTGCTAGTTTCAAAGTTAGAACCGTAGCTATTGACGGGGATACTCACGAAGAAGTTTTAGATCCTGATTTTGGTGAATCAGCTATTGGTCGTGTTGCACCTGTAGATTCAGGATTGTGGTGGATCATCCTATTGCGGGCATATGGGAAGATCACCGGTGACTATAGCTTGCAAGAAAGGGTTGATGTTCAAACAGGGTTGAAAATGATTCTTAAACTGTGTCTAACAGATGGTTTTGATATGTTTCCATCTCTGCTAGTCACTGATGGATCTTGCATGATAGACAGGCGTATGGGCATTCATGGTCACCCCCTTGAAATCCAAGCATTATTTTACTCAGCTCTTCGCTGTTCGCGTGAAATACTTGTTGTAACTGATGAAACCAATGATCTTGTTAGAGCCATTAACAACAGACTGAGTGCACTGTCATTCCACATTAGACAATATTATTGGGTCGATATGAAAAAGATGAATGAAATATACAGGTATAAAACAGAAGAGTACTCCATGGATGCCATCAACAAATTCAACATCTATCCAGAACAAATTCCTTTCTGGGTAATGGATTGGATTCCTGAAAAAGGTGGGTATCTAATTGGGAATCTGCAACCAGCTCACATGGATTTCCGGTTTTTCACACTTGGTAATCTTTGGTCTATTATTTCATCTCTGAGCACCCAAAAACAGAATGAGTCTATTTTAAATCTGATACAAGAAAAGTGGGATGATCTCGTGGGGCATATGCCACTTAAAATATGTTATCCTGCCTTGGATAATGAAGAGTGGCGGATAATTACTGGTAGTGATCCAAAGAATACCCCTTGGTCATATCACAATGGTGGATCCTGGCCTACCCTTCTATGGCAGTTCACACTGGCATGCATTAAAATGGGGAGAATTGAACTAGCTCAGAAAGCAGCTGATTTAGCTGAGAAAAGGCTGCTAGTTGATTCTTGGCCTGAATATTACGATACTCGTTCTGGAAAATTTATTGGAAAGCAAGCACGGATGTATCAAACATGGACCATAGCCGGGTTCCTTACATCCAAGATGCTTTTGAAGAATCCTGAAAAGGCATCCATGTTATTCTGTGAGGAAGATTATGATCTTCTGGAGTATTGTGTTTGTGGACTTAGCCAAAAGGGAAGAAAAAAATGCTCCAGAATTGCTGCCAAGTCTCAGATTCTTGTATGA 1815 0.4105 MNTITLLRNRAIISARRVLVASNNPSFLLSPLHHHTIDLPQPRFNLHHPFRILGFQINDVSTIARAGFKFQSFSTSIETRGSENSFERIYIQGGMNVKPFTVESVHKGEENGVREEESVVEKQAWKLLKDAIVTYCGNPVGTVAANDPGDKSPLNYDQVFIRDFIPSALAFLLKGDDEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVAIDGDTHEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYSLQERVDVQTGLKMILKLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREILVVTDETNDLVRAINNRLSALSFHIRQYYWVDMKKMNEIYRYKTEEYSMDAINKFNIYPEQIPFWVMDWIPEKGGYLIGNLQPAHMDFRFFTLGNLWSIISSLSTQKQNESILNLIQEKWDDLVGHMPLKICYPALDNEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRIELAQKAADLAEKRLLVDSWPEYYDTRSGKFIGKQARMYQTWTIAGFLTSKMLLKNPEKASMLFCEEDYDLLEYCVCGLSQKGRKKCSRIAAKSQILV 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02031 604 FunFam probable alkaline/neutral invertase B 150 556 - -
Vifa3g02031 604 Gene3D - 154 549 IPR012341 GO:0005975
Vifa3g02031 604 Pfam Alkaline and neutral invertase 124 563 IPR024746 GO:0033926
Vifa3g02031 604 SUPERFAMILY Six-hairpin glycosidases 132 555 IPR008928 GO:0005975
Vifa3g02031 604 PANTHER - 105 588 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02031 Vifa-Chr3 505740187 505745845 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02031 - - gmx:100797025 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02031 3 505740187 505745845 Vifa3g02031 3 505740187 505745845 ECH
Vifa5g03687 5 1185697537 1185700272 Vifa3g02031 3 505740187 505745845 ECH
Vifa5g03687 5 1185697537 1185700272 Vifa3g02031 3 505740187 505745845 PCT