Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01240 ATGGCTTCAGATTCCAAATCAAATCTTAAAATCACCATACAAAGCAATCCTCCAGAATCAACCTTAGCTGAACTCAACATCAAGTGTTGGCCCAAATGGGGGTGTTCAGCAGGTAAATACCAGTTAAAGTTTGATGCAGAGGAAACATGCTATTTGTTGAAAGGAAAAGTTAAAGCATACACAAAAGGTTCATCAGAGTATGTTGAGTTTGGTGCTGGAGATCTTGTGACAATTCCAAAAGGACTAAGTTGTACTTGGGATGTTTCTGTTGCTGTTGATAAGCACTACAAATTTGAAGCTTCATCATCTTCTTAA 315 0.3778 MASDSKSNLKITIQSNPPESTLAELNIKCWPKWGCSAGKYQLKFDAEETCYLLKGKVKAYTKGSSEYVEFGAGDLVTIPKGLSCTWDVSVAVDKHYKFEASSSS 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01240 104 Gene3D Jelly Rolls 2 98 IPR014710 -
Vifa3g01240 104 Pfam EutQ-like cupin domain 23 96 IPR008579 -
Vifa3g01240 104 PANTHER OS04G0445200 PROTEIN 6 99 - -
Vifa3g01240 104 SUPERFAMILY RmlC-like cupins 24 96 IPR011051 -
Vifa3g01240 104 CDD cupin_TM1112-like 30 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01240 Vifa-Chr3 320918933 320919349 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01240 - - gmx:100500522 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01240 3 320918933 320919349 Vifa3g01240 3 320918933 320919349 ECH
Vifa5g02782 5 921742140 921742587 Vifa3g01240 3 320918933 320919349 PCT