Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00903 ATGAAACACCAAAAAATAGTCATGAACCTACTTCCAAATCTACTAATACTAGTAACTATCCTATTCCTTTCAACAACATGGACCATAGCAGATGAAGTTGACGATGAGAATGAATTTGATTATATAAAAGAGAGCAAAAAGGGTCCTTCACATTGGGGAGAATTGAAGAAGGAATGGGCAATATGTAAAAATGGAGTAATGCAATCTCCAATTGATATGTCAAGTAACATAGTGAGGGTTGTGCCAAAGTTGGATGAACTAAAGAAAAATTATAAGCCTCAAAATGCAATTATAAGAAACAGAGGTCATGATATTCAGCTGAAATGGCAAGGAGATGCAGGATCAATAAATATCAACGCGACAGAATTTTTTCTACGTCAGATGCACTGGCACTCACCTTCTGAACACACCATTAATGGCCAAAGGTATGACATGGAGCTACATATGGTTCATGAAAGCCTAAAAATAAATGGGAAGAGCAAAATAGCTGTTGTTGGGCTTCTGTATAAAATTGGTGGACCCGATCCTCTACTCACCAAGTTGTCAAATTATATAAAAACCATTGAGGATACTAAAGCAGGAAGAGGTGTTGGTGTGATTAATCCCTCAGAAATCAAGGTGGGATGCGAGAAGTATTATCGATACATGGGTTCTCTCACAATCCCTCCTTGTGATGAAGGTGTCATTTGGACTATTAATAAAGAGATAAAAAGTGTGTCTAAAGCGCAGTTGGAGTTACTGGAAGAGGTTGTTCCCGATCATGCAGAGATGAATGCTAGACCTGTGCAACTCCTAAATGGAAGAGAAATACAACTATATGACTAG 825 0.3794 MKHQKIVMNLLPNLLILVTILFLSTTWTIADEVDDENEFDYIKESKKGPSHWGELKKEWAICKNGVMQSPIDMSSNIVRVVPKLDELKKNYKPQNAIIRNRGHDIQLKWQGDAGSININATEFFLRQMHWHSPSEHTINGQRYDMELHMVHESLKINGKSKIAVVGLLYKIGGPDPLLTKLSNYIKTIEDTKAGRGVGVINPSEIKVGCEKYYRYMGSLTIPPCDEGVIWTINKEIKSVSKAQLELLEEVVPDHAEMNARPVQLLNGREIQLYD 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00903 274 Pfam Eukaryotic-type carbonic anhydrase 48 271 IPR001148 -
Vifa3g00903 274 PANTHER CARBONIC ANHYDRASE 36 268 IPR023561 GO:0004089|GO:0008270
Vifa3g00903 274 SMART Carb_anhydrase_2a 41 274 IPR001148 -
Vifa3g00903 274 ProSiteProfiles Alpha-carbonic anhydrases profile. 37 274 IPR001148 -
Vifa3g00903 274 SUPERFAMILY Carbonic anhydrase 38 270 IPR036398 -
Vifa3g00903 274 ProSitePatterns Alpha-carbonic anhydrases signature. 134 150 IPR018338 GO:0004089|GO:0008270
Vifa3g00903 274 CDD alpha_CA_prokaryotic_like 48 272 IPR041891 -
Vifa3g00903 274 Gene3D Alpha carbonic anhydrase 35 274 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00903 Vifa-Chr3 223967073 224003097 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00903 K01674 - gmx:100797935 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03077 5 1015611789 1015613319 Vifa3g00903 3 223967073 224003097 PCT